RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SUB1P53999 127 aaKnown RBP eCLIP11.6□□□□□ -0.55
CPSF1-210ENST00000532935 RRAS2P62070 204 aaPredicted RBP11.6□□□□□ -0.55
CPSF1-210ENST00000532935 PVRIGQ6DKI7 326 aa11.6□□□□□ -0.55
CPSF1-210ENST00000532935 MARC2Q969Z3 335 aa11.6□□□□□ -0.55
CPSF1-210ENST00000532935 TXN2Q99757 166 aa11.6□□□□□ -0.55
CPSF1-210ENST00000532935 MLXQ9UH92 298 aa11.6□□□□□ -0.55
CPSF1-210ENST00000532935 SELENOKQ9Y6D0 94 aa11.6□□□□□ -0.55
CPSF1-210ENST00000532935 A0A0B4J2A0 478 aa11.59□□□□□ -0.55
CPSF1-210ENST00000532935 A8MZ25 164 aa11.59□□□□□ -0.55
CPSF1-210ENST00000532935 NDUFA4O00483 81 aa11.59□□□□□ -0.55
CPSF1-210ENST00000532935 NUPL2O15504 423 aaKnown RBP11.59□□□□□ -0.55
CPSF1-210ENST00000532935 HNRNPCP07910 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
CPSF1-210ENST00000532935 CTSGP08311 255 aa11.59□□□□□ -0.55
CPSF1-210ENST00000532935 C8orf88P0DMB2 117 aa11.59□□□□□ -0.55
CPSF1-210ENST00000532935 UBE2MP61081 183 aaKnown RBP11.59□□□□□ -0.55
CPSF1-210ENST00000532935 SRPXP78539 464 aa11.59□□□□□ -0.55
CPSF1-210ENST00000532935 SBSPONQ8IVN8 264 aa11.59□□□□□ -0.55
CPSF1-210ENST00000532935 LGI3Q8N145 548 aa11.59□□□□□ -0.55
CPSF1-210ENST00000532935 MRPL27Q9P0M9 148 aaKnown RBP11.59□□□□□ -0.55
CPSF1-210ENST00000532935 SHPKQ9UHJ6 478 aa11.59□□□□□ -0.55
CPSF1-210ENST00000532935 CORTO00230 105 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 CCNKO75909 580 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 SULT1A3P0DMM9 295 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 SULT1A4P0DMN0 295 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 RELQ04864 619 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-210ENST00000532935 GUCA2BQ16661 112 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 BSXQ3C1V8 233 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 TMEM128Q5BJH2 165 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 NMSQ5H8A3 153 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 BTNL8Q6UX41 500 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 LYZL2Q7Z4W2 148 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 TMEM61Q8N0U2 210 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 WDR89Q96FK6 387 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-210ENST00000532935 ZNF414Q96IQ9 312 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 C20orf24Q9BUV8 137 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 MED28Q9H204 178 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 DAZ1Q9NQZ3 744 aaKnown RBP11.58□□□□□ -0.56
CPSF1-210ENST00000532935 C19orf73Q9NVV2 129 aa11.58□□□□□ -0.56
CPSF1-210ENST00000532935 STAB2Q8WWQ8 2551 aa11.57□□□□□ -0.56
CPSF1-210ENST00000532935 IGHV3OR16-8A0A075B7F1 116 aa11.57□□□□□ -0.56
CPSF1-210ENST00000532935 CEBPZOSA8MTT3 80 aa11.57□□□□□ -0.56
CPSF1-210ENST00000532935 GNG7O60262 68 aa11.57□□□□□ -0.56
CPSF1-210ENST00000532935 VAMP1P23763 118 aa11.57□□□□□ -0.56
CPSF1-210ENST00000532935 HTR2BP41595 481 aa11.57□□□□□ -0.56
CPSF1-210ENST00000532935 CD81P60033 236 aa11.57□□□□□ -0.56
CPSF1-210ENST00000532935 SMCO1Q147U7 214 aa11.57□□□□□ -0.56
CPSF1-210ENST00000532935 HEYLQ9NQ87 328 aaPredicted RBP11.57□□□□□ -0.56
CPSF1-210ENST00000532935 CACFD1Q9UGQ2 172 aa11.57□□□□□ -0.56
CPSF1-210ENST00000532935 FLVCR2Q9UPI3 526 aa11.57□□□□□ -0.56
CPSF1-210ENST00000532935 U3KQK5 164 aa11.57□□□□□ -0.56
CPSF1-210ENST00000532935 TENM3Q9P273 2699 aa11.56□□□□□ -0.56
CPSF1-210ENST00000532935 PIGBOS1A0A0B4J2F0 54 aa11.56□□□□□ -0.56
CPSF1-210ENST00000532935 K7EMT4 169 aa11.56□□□□□ -0.56
CPSF1-210ENST00000532935 NXPH3O95157 252 aa11.56□□□□□ -0.56
CPSF1-210ENST00000532935 NPBWR1P48145 328 aa11.56□□□□□ -0.56
CPSF1-210ENST00000532935 TCTE3Q8IZS6 198 aa11.56□□□□□ -0.56
CPSF1-210ENST00000532935 ASB13Q8WXK3 278 aa11.56□□□□□ -0.56
CPSF1-210ENST00000532935 DNAH7Q8WXX0 4024 aa11.56□□□□□ -0.56
CPSF1-210ENST00000532935 TRAV25A0A0B4J276 109 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 DUXBA0A1W2PPF3 345 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 C15orf62A8K5M9 175 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 ZNF207O43670 478 aaKnown RBP11.55□□□□□ -0.56
CPSF1-210ENST00000532935 SCAF4O95104 1147 aaKnown RBP11.55□□□□□ -0.56
CPSF1-210ENST00000532935 SFT2D2O95562 160 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 CD7P09564 240 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 OPRK1P41145 380 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 TNFRSF9Q07011 255 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 PPP1R1AQ13522 171 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 ANKRD55Q3KP44 614 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 ST6GAL2Q96JF0 529 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 FNDC4Q9H6D8 234 aaPredicted RBP11.55□□□□□ -0.56
CPSF1-210ENST00000532935 TUBA4BQ9H853 241 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
CPSF1-210ENST00000532935 A0A1B0GU03 582 aa11.54□□□□□ -0.56
CPSF1-210ENST00000532935 YIF1AO95070 293 aa11.54□□□□□ -0.56
CPSF1-210ENST00000532935 ANXA7P20073 488 aaKnown RBP11.54□□□□□ -0.56
CPSF1-210ENST00000532935 MLANAQ16655 118 aa11.54□□□□□ -0.56
CPSF1-210ENST00000532935 C2orf83Q53S99 150 aa11.54□□□□□ -0.56
CPSF1-210ENST00000532935 RBPMS2Q6ZRY4 209 aaKnown RBP11.54□□□□□ -0.56
CPSF1-210ENST00000532935 LRTM2Q8N967 370 aa11.54□□□□□ -0.56
CPSF1-210ENST00000532935 SLC24A4Q8NFF2 622 aa11.54□□□□□ -0.56
CPSF1-210ENST00000532935 ZNF431Q8TF32 576 aaPredicted RBP11.54□□□□□ -0.56
CPSF1-210ENST00000532935 OR10C1Q96KK4 312 aa11.54□□□□□ -0.56
CPSF1-210ENST00000532935 HIPK2Q9H2X6 1198 aa11.54□□□□□ -0.56
CPSF1-210ENST00000532935 MRPL36Q9P0J6 103 aaKnown RBP11.54□□□□□ -0.56
CPSF1-210ENST00000532935 NBEAL2Q6ZNJ1 2754 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 SSNA1O43805 119 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 TMEM50AO95807 157 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 OR4E1P0C645 316 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 SLC16A13Q7RTY0 426 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 OR52B4Q8NGK2 314 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 OR4X1Q8NH49 305 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 OR1S1Q8NH92 325 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 RNASEH2CQ8TDP1 164 aaKnown RBP11.53□□□□□ -0.56
CPSF1-210ENST00000532935 TMEM170AQ8WVE7 144 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 WWC2-AS2Q96NR7 200 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 WFDC10AQ9H1F0 79 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 RBKSQ9H477 322 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 ZMAT4Q9H898 229 aa11.53□□□□□ -0.56
CPSF1-210ENST00000532935 RPS10-NUDT3A0A1W2PQS6 291 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms