RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.27□□□□□ -0.29
SMG1-203ENST00000532700 MRPL27Q9P0M9 148 aaKnown RBP13.27□□□□□ -0.29
SMG1-203ENST00000532700 CACFD1Q9UGQ2 172 aa13.27□□□□□ -0.29
SMG1-203ENST00000532700 UBQLN2Q9UHD9 624 aa13.27□□□□□ -0.29
SMG1-203ENST00000532700 UFC1Q9Y3C8 167 aa13.27□□□□□ -0.29
SMG1-203ENST00000532700 IGHV3-49A0A0A0MS15 119 aa13.26□□□□□ -0.29
SMG1-203ENST00000532700 A0A0B4J2A0 478 aa13.26□□□□□ -0.29
SMG1-203ENST00000532700 PLA2G10O15496 165 aa13.26□□□□□ -0.29
SMG1-203ENST00000532700 ST8SIA3O43173 380 aa13.26□□□□□ -0.29
SMG1-203ENST00000532700 MT-CO2P00403 227 aa13.26□□□□□ -0.29
SMG1-203ENST00000532700 IFNA17P01571 189 aa13.26□□□□□ -0.29
SMG1-203ENST00000532700 ELLP55199 621 aaPredicted RBP13.26□□□□□ -0.29
SMG1-203ENST00000532700 ERHP84090 104 aaKnown RBP13.26□□□□□ -0.29
SMG1-203ENST00000532700 Q6ZRM9 215 aa13.26□□□□□ -0.29
SMG1-203ENST00000532700 SLC35G3Q8N808 338 aa13.26□□□□□ -0.29
SMG1-203ENST00000532700 ZNF114Q8NC26 417 aa13.26□□□□□ -0.29
SMG1-203ENST00000532700 MRPL36Q9P0J6 103 aaKnown RBP13.26□□□□□ -0.29
SMG1-203ENST00000532700 SHPKQ9UHJ6 478 aa13.26□□□□□ -0.29
SMG1-203ENST00000532700 NDUFA4O00483 81 aa13.25□□□□□ -0.29
SMG1-203ENST00000532700 SFT2D2O95562 160 aa13.25□□□□□ -0.29
SMG1-203ENST00000532700 BTCP35070 178 aa13.25□□□□□ -0.29
SMG1-203ENST00000532700 ODF3L2Q3SX64 289 aa13.25□□□□□ -0.29
SMG1-203ENST00000532700 MARC2Q969Z3 335 aa13.25□□□□□ -0.29
SMG1-203ENST00000532700 GPR146Q96CH1 333 aa13.25□□□□□ -0.29
SMG1-203ENST00000532700 PALMDQ9NP74 551 aa13.25□□□□□ -0.29
SMG1-203ENST00000532700 DAZ1Q9NQZ3 744 aaKnown RBP13.25□□□□□ -0.29
SMG1-203ENST00000532700 DUXBA0A1W2PPF3 345 aa13.24□□□□□ -0.29
SMG1-203ENST00000532700 PPP1R1AQ13522 171 aa13.24□□□□□ -0.29
SMG1-203ENST00000532700 MZT2BQ6NZ67 158 aa13.24□□□□□ -0.29
SMG1-203ENST00000532700 SPSB3Q6PJ21 355 aa13.24□□□□□ -0.29
SMG1-203ENST00000532700 OR52E5Q8NH55 327 aa13.24□□□□□ -0.29
SMG1-203ENST00000532700 PINX1Q96BK5 328 aaKnown RBP13.24□□□□□ -0.29
SMG1-203ENST00000532700 ENY2Q9NPA8 101 aa13.24□□□□□ -0.29
SMG1-203ENST00000532700 PRR13Q9NZ81 148 aa13.24□□□□□ -0.29
SMG1-203ENST00000532700 CACNG5Q9UF02 275 aa13.24□□□□□ -0.29
SMG1-203ENST00000532700 IGHV3OR16-13A0A075B7E8 117 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 IGHV3-74A0A0B4J1X5 117 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 SULT1A3P0DMM9 295 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 SULT1A4P0DMN0 295 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 SPCS3P61009 180 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 ZNF124Q15973 351 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 AARDQ4LEZ3 155 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 SLC16A13Q7RTY0 426 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 LYZL2Q7Z4W2 148 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 LRTM2Q8N967 370 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 RNF2Q99496 336 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 FLVCR2Q9UPI3 526 aa13.23□□□□□ -0.29
SMG1-203ENST00000532700 TRAV25A0A0B4J276 109 aa13.22□□□□□ -0.29
SMG1-203ENST00000532700 INS-IGF2F8WCM5 200 aa13.22□□□□□ -0.29
SMG1-203ENST00000532700 TSPAN4O14817 238 aa13.22□□□□□ -0.29
SMG1-203ENST00000532700 UPK1BO75841 260 aa13.22□□□□□ -0.29
SMG1-203ENST00000532700 RNASE2P10153 161 aaKnown RBP13.22□□□□□ -0.29
SMG1-203ENST00000532700 SNCAP37840 140 aa13.22□□□□□ -0.29
SMG1-203ENST00000532700 HOXA1P49639 335 aaPredicted RBP13.22□□□□□ -0.29
SMG1-203ENST00000532700 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMG1-203ENST00000532700 MLANAQ16655 118 aa13.22□□□□□ -0.29
SMG1-203ENST00000532700 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
SMG1-203ENST00000532700 RBPMS2Q6ZRY4 209 aaKnown RBP13.22□□□□□ -0.29
SMG1-203ENST00000532700 ATP6V0BQ99437 205 aa13.22□□□□□ -0.29
SMG1-203ENST00000532700 OVOL2Q9BRP0 275 aa13.22□□□□□ -0.29
SMG1-203ENST00000532700 FNDC4Q9H6D8 234 aaPredicted RBP13.22□□□□□ -0.29
SMG1-203ENST00000532700 A0A1B0GU03 582 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 FAM240BA0A1B0GVZ2 78 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 C9orf170A2RU37 121 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 APOHP02749 345 aaPredicted RBP13.21□□□□□ -0.29
SMG1-203ENST00000532700 TCRBP04435 133 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 OR4E1P0C645 316 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 FCGR2BP31994 310 aaPredicted RBP13.21□□□□□ -0.29
SMG1-203ENST00000532700 MFAP4P55083 255 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 EWSR1Q01844 656 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMG1-203ENST00000532700 ASAH1Q13510 395 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 SMCO1Q147U7 214 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 ANKRD55Q3KP44 614 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 C4orf46Q504U0 113 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 NMSQ5H8A3 153 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 LILRB2Q8N423 598 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 OR10C1Q96KK4 312 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 SPAG8Q99932 426 aaPredicted RBP13.21□□□□□ -0.29
SMG1-203ENST00000532700 GGTLC1Q9BX51 225 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 C20orf85Q9H1P6 137 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 SMPXQ9UHP9 88 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 TMED3Q9Y3Q3 217 aa13.21□□□□□ -0.29
SMG1-203ENST00000532700 IGHV7-4-1A0A0J9YVY3 117 aa13.2□□□□□ -0.3
SMG1-203ENST00000532700 LCE6AA0A183 80 aa13.2□□□□□ -0.3
SMG1-203ENST00000532700 C15orf62A8K5M9 175 aa13.2□□□□□ -0.3
SMG1-203ENST00000532700 K7EMT4 169 aa13.2□□□□□ -0.3
SMG1-203ENST00000532700 CHEK1O14757 476 aa13.2□□□□□ -0.3
SMG1-203ENST00000532700 ANXA7P20073 488 aaKnown RBP13.2□□□□□ -0.3
SMG1-203ENST00000532700 LYG2Q86SG7 212 aa13.2□□□□□ -0.3
SMG1-203ENST00000532700 COQ8AQ8NI60 647 aa13.2□□□□□ -0.3
SMG1-203ENST00000532700 ZFAND3Q9H8U3 227 aa13.2□□□□□ -0.3
SMG1-203ENST00000532700 CEBPZOSA8MTT3 80 aa13.19□□□□□ -0.3
SMG1-203ENST00000532700 DHRS2Q13268 280 aa13.19□□□□□ -0.3
SMG1-203ENST00000532700 OR1S1Q8NH92 325 aa13.19□□□□□ -0.3
SMG1-203ENST00000532700 RHPN1-AS1Q9BWJ2 59 aa13.19□□□□□ -0.3
SMG1-203ENST00000532700 TBC1D24Q9ULP9 559 aa13.19□□□□□ -0.3
SMG1-203ENST00000532700 IGKV3-7A0A075B6H7 116 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 LOC102724200A0A096LPH7 203 aaPredicted RBP13.18□□□□□ -0.3
SMG1-203ENST00000532700 IGHV3-66A0A0C4DH42 116 aa13.18□□□□□ -0.3
SMG1-203ENST00000532700 NUPL2O15504 423 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms