RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 RAB5AP20339 215 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 LMO4P61968 165 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 TMEM241Q24JQ0 296 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 CLEC12BQ2HXU8 276 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 Q8WTZ3 238 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 CFHR4Q92496 578 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 SCO2A0A1W2PP80 73 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 HOXB4P17483 251 aaPredicted RBP12.13□□□□□ -0.47
SRPRA-206ENST00000532259 PAX2Q02962 417 aa12.13□□□□□ -0.47
SRPRA-206ENST00000532259 NCBP2LA6PVI3 153 aaKnown RBP12.12□□□□□ -0.47
SRPRA-206ENST00000532259 TEX22C9J3V5 150 aa12.12□□□□□ -0.47
SRPRA-206ENST00000532259 PMS2P11Q13670 270 aa12.12□□□□□ -0.47
SRPRA-206ENST00000532259 HABP2Q14520 560 aaPredicted RBP12.12□□□□□ -0.47
SRPRA-206ENST00000532259 CYP2G1PQ6ZSU1 146 aa12.12□□□□□ -0.47
SRPRA-206ENST00000532259 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
SRPRA-206ENST00000532259 DMRT1Q9Y5R6 373 aa12.12□□□□□ -0.47
SRPRA-206ENST00000532259 UBR5O95071 2799 aaPredicted RBP12.12□□□□□ -0.47
SRPRA-206ENST00000532259 FNDC10F2Z333 226 aa12.12□□□□□ -0.47
SRPRA-206ENST00000532259 TMEM250H0YL14 139 aa12.12□□□□□ -0.47
SRPRA-206ENST00000532259 RPS10P46783 165 aaKnown RBP12.12□□□□□ -0.47
SRPRA-206ENST00000532259 RPL23P62829 140 aaKnown RBP12.12□□□□□ -0.47
SRPRA-206ENST00000532259 RNASEH2CQ8TDP1 164 aaKnown RBP12.12□□□□□ -0.47
SRPRA-206ENST00000532259 CACNG8Q8WXS5 425 aa12.12□□□□□ -0.47
SRPRA-206ENST00000532259 TUBA4BQ9H853 241 aa12.12□□□□□ -0.47
SRPRA-206ENST00000532259 FUT9Q9Y231 359 aa12.12□□□□□ -0.47
SRPRA-206ENST00000532259 S4R3C0 116 aa12.12□□□□□ -0.47
SRPRA-206ENST00000532259 USP9YO00507 2555 aaPredicted RBP12.12□□□□□ -0.47
SRPRA-206ENST00000532259 IGKV1D-37A0A075B6S9 117 aa12.11□□□□□ -0.47
SRPRA-206ENST00000532259 IGHV3OR16-10A0A075B7F0 116 aa12.11□□□□□ -0.47
SRPRA-206ENST00000532259 INS-IGF2F8WCM5 200 aa12.11□□□□□ -0.47
SRPRA-206ENST00000532259 TOX4O94842 621 aa12.11□□□□□ -0.47
SRPRA-206ENST00000532259 GPX4P36969 197 aaPredicted RBP12.11□□□□□ -0.47
SRPRA-206ENST00000532259 CEACAM3P40198 252 aa12.11□□□□□ -0.47
SRPRA-206ENST00000532259 ELOBQ15370 118 aa12.11□□□□□ -0.47
SRPRA-206ENST00000532259 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
SRPRA-206ENST00000532259 EAF1Q96JC9 268 aaPredicted RBP12.11□□□□□ -0.47
SRPRA-206ENST00000532259 ATP5IP56385 69 aaPredicted RBP12.11□□□□□ -0.47
SRPRA-206ENST00000532259 FLI1Q01543 452 aaPredicted RBP12.11□□□□□ -0.47
SRPRA-206ENST00000532259 SIRPDQ9H106 197 aa12.11□□□□□ -0.47
SRPRA-206ENST00000532259 NBR2O15453 112 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 OR5G3P0C626 314 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 ORM2P19652 201 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 PNRC1Q12796 327 aaPredicted RBP12.1□□□□□ -0.47
SRPRA-206ENST00000532259 ZNF114Q8NC26 417 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 OR4X1Q8NH49 305 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 ZNF503Q96F45 646 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 CCL19Q99731 98 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 ABCA12Q86UK0 2595 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 A0A087WWC5 75 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 C1orf196B1AJZ1 125 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 MT-CO2P00403 227 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 C16orf82Q7Z2V1 217 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 YPEL4Q96NS1 127 aa12.1□□□□□ -0.47
SRPRA-206ENST00000532259 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.09□□□□□ -0.478e-7■■■■□ 25.8
SRPRA-206ENST00000532259 PTPN13Q12923 2485 aa12.09□□□□□ -0.47
SRPRA-206ENST00000532259 ZANQ9Y493 2812 aa12.09□□□□□ -0.47
SRPRA-206ENST00000532259 COX7A2P2O60397 106 aa12.09□□□□□ -0.47
SRPRA-206ENST00000532259 NANPQ8TBE9 248 aa12.09□□□□□ -0.47
SRPRA-206ENST00000532259 TBX15Q96SF7 602 aa12.09□□□□□ -0.47
SRPRA-206ENST00000532259 WNT10AQ9GZT5 417 aa12.09□□□□□ -0.47
SRPRA-206ENST00000532259 TNFRSF19Q9NS68 423 aa12.09□□□□□ -0.47
SRPRA-206ENST00000532259 IGHV2-70DA0A0C4DH43 119 aa12.09□□□□□ -0.47
SRPRA-206ENST00000532259 PYYP10082 97 aa12.09□□□□□ -0.47
SRPRA-206ENST00000532259 FXYD3Q14802 87 aa12.09□□□□□ -0.47
SRPRA-206ENST00000532259 TRBV20OR9-2A0A075B6H5 130 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 TCRBV4S1A1TA0A5B7 111 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 PDE6DO43924 150 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 AKR1D1P51857 326 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 RAB5BP61020 215 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 FAM120AOSQ5T036 256 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 PATE2Q6UY27 113 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 OR1B1Q8NGR6 318 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 ELOVL1Q9BW60 279 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 DNAJC4Q9NNZ3 241 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 TECRQ9NZ01 308 aaKnown RBP12.08□□□□□ -0.48
SRPRA-206ENST00000532259 F11RQ9Y624 299 aaKnown RBP12.08□□□□□ -0.48
SRPRA-206ENST00000532259 A1L4Q6 167 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 OR5AU1Q8NGC0 362 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 OR1P1Q8NH06 330 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 ZNF355PQ9NSJ1 428 aa12.08□□□□□ -0.48
SRPRA-206ENST00000532259 ANKRD17O75179 2603 aaKnown RBP12.07□□□□□ -0.48
SRPRA-206ENST00000532259 IGHV4-61A0A0C4DH41 118 aa12.07□□□□□ -0.48
SRPRA-206ENST00000532259 B4DEV8 164 aa12.07□□□□□ -0.48
SRPRA-206ENST00000532259 CLDN34H7C241 214 aa12.07□□□□□ -0.48
SRPRA-206ENST00000532259 SNRPEP62304 92 aaKnown RBP12.07□□□□□ -0.48
SRPRA-206ENST00000532259 SRSF1Q07955 248 aaKnown RBP eCLIP12.07□□□□□ -0.48
SRPRA-206ENST00000532259 LEMD1Q68G75 181 aa12.07□□□□□ -0.48
SRPRA-206ENST00000532259 PSMB11A5LHX3 300 aa12.06□□□□□ -0.48
SRPRA-206ENST00000532259 MAS1LP35410 378 aa12.06□□□□□ -0.48
SRPRA-206ENST00000532259 RPL35P42766 123 aaKnown RBP12.06□□□□□ -0.48
SRPRA-206ENST00000532259 TMEM249Q2WGJ8 235 aa12.06□□□□□ -0.48
SRPRA-206ENST00000532259 C10orf113Q5VZT2 155 aa12.06□□□□□ -0.48
SRPRA-206ENST00000532259 C1orf122Q6ZSJ8 110 aa12.06□□□□□ -0.48
SRPRA-206ENST00000532259 MRPL41Q8IXM3 137 aaKnown RBP12.06□□□□□ -0.48
SRPRA-206ENST00000532259 ZNF843Q8N446 348 aa12.06□□□□□ -0.48
SRPRA-206ENST00000532259 PERPQ96FX8 193 aa12.06□□□□□ -0.48
SRPRA-206ENST00000532259 AJUBAQ96IF1 538 aa12.06□□□□□ -0.48
SRPRA-206ENST00000532259 SLC25A2Q9BXI2 301 aa12.06□□□□□ -0.48
SRPRA-206ENST00000532259 CSPG4Q6UVK1 2322 aa12.06□□□□□ -0.48
SRPRA-206ENST00000532259 CLN5O75503 358 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms