RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 GAR1Q9NY12 217 aaKnown RBP9.71□□□□□ -0.86
COPB1-208ENST00000532088 TRAV14DV4A0A0A6YYC5 116 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 TRBV7-1A0A0A6YYK4 115 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 TCRBV4S1A1TA0A5B7 111 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 PMS2P5A8MQ11 134 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 FNDC10F2Z333 226 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 K7EIM0 57 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 PRH1P02810 166 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 IFNA4P05014 189 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 CD28P10747 220 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 KRTAP10-3P60369 221 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 BAXQ07812 192 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 C15orf32Q32M92 178 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 LRRC37A5PQ49AS3 106 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 ZNF343Q6P1L6 599 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 C12orf54Q6X4T0 127 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 ETV3LQ6ZN32 361 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 C19orf35Q6ZS72 473 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 TCTE3Q8IZS6 198 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 OR2T35Q8NGX2 323 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 C4orf3Q8WVX3 66 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 EEF1AKMT3Q96AZ1 226 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 MS4A10Q96PG2 267 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 OR4C12Q96R67 309 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 GGACTQ9BVM4 153 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 SLC25A31Q9H0C2 315 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 OR5AC2Q9NZP5 309 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 MBD2Q9UBB5 411 aa9.7□□□□□ -0.86
COPB1-208ENST00000532088 A0A1B0GVG6 124 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 PRSS46E5RG02 174 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 H3BP45 60 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 CCNKO75909 580 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 NDUFB8O95169 186 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 MT-CO2P00403 227 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 LGALS1P09382 135 aaKnown RBP9.69□□□□□ -0.86
COPB1-208ENST00000532088 OPRK1P41145 380 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 CAV2P51636 162 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 CD69Q07108 199 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 STX12Q86Y82 276 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 TMEM252Q8N6L7 170 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 ST6GAL2Q96JF0 529 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 CCDC140Q96MF4 163 aa9.69□□□□□ -0.86
COPB1-208ENST00000532088 CITED2Q99967 270 aaPredicted RBP9.69□□□□□ -0.86
COPB1-208ENST00000532088 hCG_2014768A0A024R1R8 64 aa9.68□□□□□ -0.86
COPB1-208ENST00000532088 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.68□□□□□ -0.86
COPB1-208ENST00000532088 G3V3Q6 166 aa9.68□□□□□ -0.86
COPB1-208ENST00000532088 SULT1A1P50225 295 aa9.68□□□□□ -0.86
COPB1-208ENST00000532088 MFAP4P55083 255 aa9.68□□□□□ -0.86
COPB1-208ENST00000532088 AKAP14Q86UN6 197 aa9.68□□□□□ -0.86
COPB1-208ENST00000532088 TMEM116Q8NCL8 245 aa9.68□□□□□ -0.86
COPB1-208ENST00000532088 OR10P1Q8NGE3 313 aa9.68□□□□□ -0.86
COPB1-208ENST00000532088 OR4X1Q8NH49 305 aa9.68□□□□□ -0.86
COPB1-208ENST00000532088 ZNF502Q8TBZ5 544 aa9.68□□□□□ -0.86
COPB1-208ENST00000532088 SCARB1Q8WTV0 552 aa9.68□□□□□ -0.86
COPB1-208ENST00000532088 PINX1Q96BK5 328 aaKnown RBP9.68□□□□□ -0.86
COPB1-208ENST00000532088 FNDC4Q9H6D8 234 aaPredicted RBP9.68□□□□□ -0.86
COPB1-208ENST00000532088 RANGRFQ9HD47 186 aaPredicted RBP9.68□□□□□ -0.86
COPB1-208ENST00000532088 C21orf62Q9NYP8 219 aa9.68□□□□□ -0.86
COPB1-208ENST00000532088 MFSD2BA6NFX1 497 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 FAM24AA6NFZ4 105 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 I3L521 148 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 SCGB2A1O75556 95 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 METTL15P1P0C7V9 234 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 S100A11P31949 105 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 NPBWR1P48145 328 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 HBG1P69891 147 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 HBG2P69892 147 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 DLK1P80370 383 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 ATP6V1FQ16864 119 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 LCNL1Q6ZST4 164 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 SLC16A13Q7RTY0 426 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 C3orf56Q8N813 242 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 DCUN1D4Q92564 292 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 AQP10Q96PS8 301 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 ATRQ13535 2644 aa9.67□□□□□ -0.86
COPB1-208ENST00000532088 TRAV30A0A087WSZ9 112 aa9.66□□□□□ -0.86
COPB1-208ENST00000532088 IGSF23A1L1A6 192 aa9.66□□□□□ -0.86
COPB1-208ENST00000532088 HMSDA8MTL9 139 aa9.66□□□□□ -0.86
COPB1-208ENST00000532088 RPL12P30050 165 aaKnown RBP9.66□□□□□ -0.86
COPB1-208ENST00000532088 NUP62P37198 522 aaPredicted RBP9.66□□□□□ -0.86
COPB1-208ENST00000532088 EWSR1Q01844 656 aaKnown RBP eCLIP9.66□□□□□ -0.86
COPB1-208ENST00000532088 Q5BKY6 102 aa9.66□□□□□ -0.86
COPB1-208ENST00000532088 SPSB3Q6PJ21 355 aa9.66□□□□□ -0.86
COPB1-208ENST00000532088 BSCL2Q96G97 398 aaPredicted RBP9.66□□□□□ -0.86
COPB1-208ENST00000532088 SLC35E1Q96K37 410 aa9.66□□□□□ -0.86
COPB1-208ENST00000532088 GNB4Q9HAV0 340 aa9.66□□□□□ -0.86
COPB1-208ENST00000532088 PEF1Q9UBV8 284 aaKnown RBP9.66□□□□□ -0.86
COPB1-208ENST00000532088 PAIP2BQ9ULR5 123 aaKnown RBP9.66□□□□□ -0.86
COPB1-208ENST00000532088 TNFSF18Q9UNG2 199 aa9.66□□□□□ -0.86
COPB1-208ENST00000532088 CLN5O75503 358 aa9.65□□□□□ -0.86
COPB1-208ENST00000532088 HSPB1P04792 205 aaKnown RBP9.65□□□□□ -0.86
COPB1-208ENST00000532088 VWC2Q2TAL6 325 aa9.65□□□□□ -0.86
COPB1-208ENST00000532088 KHDC1LQ5JSQ8 128 aa9.65□□□□□ -0.86
COPB1-208ENST00000532088 OR8G2PQ6IF36 304 aa9.65□□□□□ -0.86
COPB1-208ENST00000532088 ACSM6Q6P461 480 aa9.65□□□□□ -0.86
COPB1-208ENST00000532088 HAPLN4Q86UW8 402 aa9.65□□□□□ -0.86
COPB1-208ENST00000532088 C11orf44Q8N8P7 122 aa9.65□□□□□ -0.86
COPB1-208ENST00000532088 KLHL30-AS1Q8NEE0 82 aa9.65□□□□□ -0.86
COPB1-208ENST00000532088 PFDN2Q9UHV9 154 aa9.65□□□□□ -0.86
COPB1-208ENST00000532088 HSPB11Q9Y547 144 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms