RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 SACSQ9NZJ4 4579 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 STOML2Q9UJZ1 356 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 POMPQ9Y244 141 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 LINC00588Q9Y4M8 146 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 SNX10Q9Y5X0 201 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 V9GYQ6 96 aa1.36□□□□□ -2.19
CD44-233ENST00000531141 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.35□□□□□ -2.19
CD44-233ENST00000531141 DAPL1A0PJW8 107 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 EFCAB9A8MZ26 197 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 LY6LH3BQJ8 138 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 PIN1P1O15428 100 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 TGOLN2O43493 480 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 HLA-DRAP01903 254 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 IFNA16P05015 189 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 RPS17P08708 135 aaKnown RBP1.35□□□□□ -2.19
CD44-233ENST00000531141 P0DMU3 169 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 FAM231AP0DMU4 169 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 FAM231CP0DMU5 169 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 UGT2B7P16662 529 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 AKR1C4P17516 323 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 MSNP26038 577 aaKnown RBP1.35□□□□□ -2.19
CD44-233ENST00000531141 TSPOP30536 169 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 CBX5P45973 191 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 CAPZBP47756 277 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 SERPINB9P50453 376 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 OR4D2P58180 307 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 CXCR4P61073 352 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 PRDX1Q06830 199 aaKnown RBP1.35□□□□□ -2.19
CD44-233ENST00000531141 TFF3Q07654 80 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 SPA17Q15506 151 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 HIST3H3Q16695 136 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 GUK1Q16774 197 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 HLA-DRB5Q30154 266 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 C9orf64Q5T6V5 341 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 FAM162BQ5T6X4 162 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 TNFAIP8L2Q6P589 184 aaPredicted RBP1.35□□□□□ -2.19
CD44-233ENST00000531141 SCXQ7RTU7 201 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 TRAPPC5Q8IUR0 188 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.35□□□□□ -2.19
CD44-233ENST00000531141 OR1M1Q8NGA1 313 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 ERMNQ8TAM6 284 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 DTD1Q8TEA8 209 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 C16orf78Q8WTQ4 265 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 TESCQ96BS2 214 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 TLCD1Q96CP7 247 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 PRAP1Q96NZ9 151 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 XPNPEP1Q9NQW7 623 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 FKBP14Q9NWM8 211 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 FAM206AQ9NX38 181 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.35□□□□□ -2.19
CD44-233ENST00000531141 PHLDA3Q9Y5J5 127 aa1.35□□□□□ -2.19
CD44-233ENST00000531141 CMYA5Q8N3K9 4069 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 TRAV8-2A0A0B4J237 113 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 TINCRA0A1B0GVN0 87 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 OR5K4A6NMS3 321 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 H3BQV1 296 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 KPNA3O00505 521 aaPredicted RBP1.34□□□□□ -2.19
CD44-233ENST00000531141 PIRO00625 290 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 AZIN1O14977 448 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 SLC25A20O43772 301 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 TNFP01375 233 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 TCRBP04435 133 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 HIST1H1EP10412 219 aaKnown RBP1.34□□□□□ -2.19
CD44-233ENST00000531141 CFL1P23528 166 aaKnown RBP1.34□□□□□ -2.19
CD44-233ENST00000531141 PSMA1P25786 263 aaKnown RBP1.34□□□□□ -2.19
CD44-233ENST00000531141 RCVRNP35243 200 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 IFNGR2P38484 337 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 MAGEA12P43365 314 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 SULT1A1P50225 295 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 SULT1A2P50226 295 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 LSM6P62312 80 aaKnown RBP1.34□□□□□ -2.19
CD44-233ENST00000531141 POLR2GP62487 172 aaKnown RBP eCLIP1.34□□□□□ -2.19
CD44-233ENST00000531141 FOXF1Q12946 379 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 PAFAH1B3Q15102 231 aaKnown RBP1.34□□□□□ -2.19
CD44-233ENST00000531141 CCDC121Q6ZUS5 278 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 OLIG3Q7RTU3 272 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 DOLPP1Q86YN1 238 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 RIBC1Q8N443 379 aaPredicted RBP1.34□□□□□ -2.19
CD44-233ENST00000531141 OR11G2Q8NGC1 345 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 OR4P4Q8NGL7 312 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 HAVCR2Q8TDQ0 301 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 ASB13Q8WXK3 278 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 RAB8BQ92930 207 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 TMA16Q96EY4 203 aaKnown RBP1.34□□□□□ -2.19
CD44-233ENST00000531141 IMP4Q96G21 291 aaKnown RBP1.34□□□□□ -2.19
CD44-233ENST00000531141 PGLYRP3Q96LB9 341 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 EBNA1BP2Q99848 306 aaKnown RBP1.34□□□□□ -2.19
CD44-233ENST00000531141 FAAP24Q9BTP7 215 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 TMEM208Q9BTX3 173 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 REG4Q9BYZ8 158 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 BCL2L14Q9BZR8 327 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 TLNRD1Q9H1K6 362 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 OR51B6Q9H340 312 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 UBQLN4Q9NRR5 601 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 MED29Q9NX70 200 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 TAS2R13Q9NYV9 303 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 CRCT1Q9UGL9 99 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 ARL2BPQ9Y2Y0 163 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 ARL5AQ9Y689 179 aa1.34□□□□□ -2.19
CD44-233ENST00000531141 SPTBP11277 2137 aa1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms