RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 PRSS8Q16651 343 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 ZNF429Q86V71 674 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 SVBPQ8N300 66 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 BPIFCQ8NFQ6 507 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 OR5T1Q8NG75 326 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 CD300LFQ8TDQ1 290 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 TCTEX1D2Q8WW35 142 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 GPR146Q96CH1 333 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 AIFM2Q9BRQ8 373 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 TPSG1Q9NRR2 321 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 RCL1Q9Y2P8 373 aaKnown RBP8.5□□□□□ -1.05
CAPN1-221ENST00000531068 PLXNB1O43157 2135 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 FCGR3BO75015 233 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 SCAF4O95104 1147 aaKnown RBP8.49□□□□□ -1.05
CAPN1-221ENST00000531068 S1PR2O95136 353 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 SERPINE2P07093 398 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 KIR2DS2P43631 304 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 TNXAQ16473 311 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 PXDC1Q5TGL8 231 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 DPPA3Q6W0C5 159 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 MMD2Q8IY49 270 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 OR4S2Q8NH73 311 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 VSTM2AQ8TAG5 236 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 DLX4Q92988 240 aaPredicted RBP8.49□□□□□ -1.05
CAPN1-221ENST00000531068 GNPNAT1Q96EK6 184 aaPredicted RBP8.49□□□□□ -1.05
CAPN1-221ENST00000531068 USMG5Q96IX5 58 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 PARD6GQ9BYG4 376 aaPredicted RBP8.49□□□□□ -1.05
CAPN1-221ENST00000531068 CACFD1Q9UGQ2 172 aa8.49□□□□□ -1.05
CAPN1-221ENST00000531068 DFFBO76075 338 aa8.48□□□□□ -1.05
CAPN1-221ENST00000531068 HPRT1P00492 218 aa8.48□□□□□ -1.05
CAPN1-221ENST00000531068 HRASP01112 189 aa8.48□□□□□ -1.05
CAPN1-221ENST00000531068 IGHV3-11P01762 117 aa8.48□□□□□ -1.05
CAPN1-221ENST00000531068 VAMP2P63027 116 aa8.48□□□□□ -1.05
CAPN1-221ENST00000531068 EWSR1Q01844 656 aaKnown RBP eCLIP8.48□□□□□ -1.05
CAPN1-221ENST00000531068 IZUMO4Q1ZYL8 232 aa8.48□□□□□ -1.05
CAPN1-221ENST00000531068 ASPHD1Q5U4P2 390 aa8.48□□□□□ -1.05
CAPN1-221ENST00000531068 TMEM252Q8N6L7 170 aa8.48□□□□□ -1.05
CAPN1-221ENST00000531068 ELOVL1Q9BW60 279 aa8.48□□□□□ -1.05
CAPN1-221ENST00000531068 TGP01266 2768 aa8.48□□□□□ -1.05
CAPN1-221ENST00000531068 SAP30O75446 220 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 SNAPINO95295 136 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 SCGB1D2O95969 90 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 H2AFB1P0C5Y9 115 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 OR9G9P0C7N8 305 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 MAS1LP35410 378 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 SLURP1P55000 103 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 SSBP2P81877 361 aaPredicted RBP8.47□□□□□ -1.05
CAPN1-221ENST00000531068 CD69Q07108 199 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 MRGPRG-AS1Q2M3A8 158 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 OR2B11Q5JQS5 317 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 SRSF12Q8WXF0 261 aaKnown RBP8.47□□□□□ -1.05
CAPN1-221ENST00000531068 OR4C12Q96R67 309 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 B9D2Q9BPU9 175 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 ZNF430Q9H8G1 570 aaPredicted RBP8.47□□□□□ -1.05
CAPN1-221ENST00000531068 WFDC1Q9HC57 220 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 UQCC1Q9NVA1 299 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 ZNF256Q9Y2P7 627 aaPredicted RBP8.47□□□□□ -1.05
CAPN1-221ENST00000531068 TNCP24821 2201 aa8.47□□□□□ -1.05
CAPN1-221ENST00000531068 IGHV4OR15-8A0A075B7B6 117 aa8.46□□□□□ -1.06
CAPN1-221ENST00000531068 A0A087WW49 117 aa8.46□□□□□ -1.06
CAPN1-221ENST00000531068 WRBO00258 174 aa8.46□□□□□ -1.06
CAPN1-221ENST00000531068 NDUFS6O75380 124 aaKnown RBP8.46□□□□□ -1.06
CAPN1-221ENST00000531068 MED6O75586 246 aa8.46□□□□□ -1.06
CAPN1-221ENST00000531068 APOC3P02656 99 aa8.46□□□□□ -1.06
CAPN1-221ENST00000531068 SAA1P0DJI8 122 aaPredicted RBP8.46□□□□□ -1.06
CAPN1-221ENST00000531068 G6PCP35575 357 aa8.46□□□□□ -1.06
CAPN1-221ENST00000531068 PAX9P55771 341 aa8.46□□□□□ -1.06
CAPN1-221ENST00000531068 POLR2GP62487 172 aaKnown RBP eCLIP8.46□□□□□ -1.06
CAPN1-221ENST00000531068 PEA15Q15121 130 aa8.46□□□□□ -1.06
CAPN1-221ENST00000531068 ACSM6Q6P461 480 aa8.46□□□□□ -1.06
CAPN1-221ENST00000531068 PUSL1Q8N0Z8 303 aaKnown RBP8.46□□□□□ -1.06
CAPN1-221ENST00000531068 TMEM167AQ8TBQ9 72 aa8.46□□□□□ -1.06
CAPN1-221ENST00000531068 PLA2G2EQ9NZK7 142 aa8.46□□□□□ -1.06
CAPN1-221ENST00000531068 PEF1Q9UBV8 284 aaKnown RBP8.46□□□□□ -1.06
CAPN1-221ENST00000531068 PRKDCP78527 4128 aaKnown RBP8.46□□□□□ -1.06
CAPN1-221ENST00000531068 TRAV1-1A0A0B4J248 108 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 FAM223BA6NKX1 122 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 MARCH11A6NNE9 402 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 KBTBD11O94819 623 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 TMEM50AO95807 157 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 KRASP01116 189 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 NHLRC4P0CG21 123 aaPredicted RBP8.45□□□□□ -1.06
CAPN1-221ENST00000531068 NQO2P16083 231 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 SNCAP37840 140 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 SULT1A1P50225 295 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 NHLH2Q02577 135 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 ATP5G2Q06055 141 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 PMS2P11Q13670 270 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 FAM209BQ5JX69 171 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 ZNF343Q6P1L6 599 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 STX12Q86Y82 276 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 FAM223AQ8IWN6 122 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 TTC9CQ8N5M4 171 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 OR4A5Q8NH83 315 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 PBDC1Q9BVG4 233 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 NKX6-2Q9C056 277 aaPredicted RBP8.45□□□□□ -1.06
CAPN1-221ENST00000531068 CACNG5Q9UF02 275 aa8.45□□□□□ -1.06
CAPN1-221ENST00000531068 LSM4Q9Y4Z0 139 aaKnown RBP8.45□□□□□ -1.06
CAPN1-221ENST00000531068 TRAV3A0A0B4J244 114 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 IGSF23A1L1A6 192 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms