RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 IFITM3Q01628 133 aa14.25□□□□□ -0.13
UBXN1-211ENST00000531056 NMSQ5H8A3 153 aa14.25□□□□□ -0.13
UBXN1-211ENST00000531056 CENPSQ8N2Z9 138 aa14.25□□□□□ -0.13
UBXN1-211ENST00000531056 SHPKQ9UHJ6 478 aa14.25□□□□□ -0.13
UBXN1-211ENST00000531056 TRAV25A0A0B4J276 109 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 FAM240BA0A1B0GVZ2 78 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 C15orf62A8K5M9 175 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 GNG7O60262 68 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 SCAF4O95104 1147 aaKnown RBP14.24□□□□□ -0.13
UBXN1-211ENST00000531056 SULT1A3P0DMM9 295 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 SULT1A4P0DMN0 295 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 ANXA3P12429 323 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 SRPXP78539 464 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 TMEM128Q5BJH2 165 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 LYZL2Q7Z4W2 148 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 LGI3Q8N145 548 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 OR10C1Q96KK4 312 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 RCHY1Q96PM5 261 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 C20orf24Q9BUV8 137 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 WFDC10AQ9H1F0 79 aa14.24□□□□□ -0.13
UBXN1-211ENST00000531056 FNDC4Q9H6D8 234 aaPredicted RBP14.24□□□□□ -0.13
UBXN1-211ENST00000531056 ZNF207O43670 478 aaKnown RBP14.23□□□□□ -0.13
UBXN1-211ENST00000531056 LINC00322Q6ZN03 302 aaPredicted RBP14.23□□□□□ -0.13
UBXN1-211ENST00000531056 DUSP18Q8NEJ0 188 aa14.23□□□□□ -0.13
UBXN1-211ENST00000531056 TUBA4BQ9H853 241 aa14.23□□□□□ -0.13
UBXN1-211ENST00000531056 ZMAT4Q9H898 229 aa14.23□□□□□ -0.13
UBXN1-211ENST00000531056 MRPL36Q9P0J6 103 aaKnown RBP14.23□□□□□ -0.13
UBXN1-211ENST00000531056 NXPH3O95157 252 aa14.22□□□□□ -0.13
UBXN1-211ENST00000531056 TCRBP04435 133 aa14.22□□□□□ -0.13
UBXN1-211ENST00000531056 HTR2BP41595 481 aa14.22□□□□□ -0.13
UBXN1-211ENST00000531056 NPBWR1P48145 328 aa14.22□□□□□ -0.13
UBXN1-211ENST00000531056 UBE2MP61081 183 aaKnown RBP14.22□□□□□ -0.13
UBXN1-211ENST00000531056 SMCO1Q147U7 214 aa14.22□□□□□ -0.13
UBXN1-211ENST00000531056 HAGHQ16775 308 aa14.22□□□□□ -0.13
UBXN1-211ENST00000531056 C2orf83Q53S99 150 aa14.22□□□□□ -0.13
UBXN1-211ENST00000531056 DEFB125Q8N687 156 aa14.22□□□□□ -0.13
UBXN1-211ENST00000531056 ENKURQ8TC29 256 aa14.22□□□□□ -0.13
UBXN1-211ENST00000531056 HEYLQ9NQ87 328 aaPredicted RBP14.22□□□□□ -0.13
UBXN1-211ENST00000531056 CACFD1Q9UGQ2 172 aa14.22□□□□□ -0.13
UBXN1-211ENST00000531056 DUXBA0A1W2PPF3 345 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 CEBPZOSA8MTT3 80 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 OR11H12B2RN74 326 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 OPRK1P41145 380 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 TNFRSF9Q07011 255 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 ANKRD55Q3KP44 614 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 RBPMS2Q6ZRY4 209 aaKnown RBP14.21□□□□□ -0.13
UBXN1-211ENST00000531056 SLC16A13Q7RTY0 426 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 LRTM2Q8N967 370 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 SLC24A4Q8NFF2 622 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 OR52B4Q8NGK2 314 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 TMEM170AQ8WVE7 144 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 C20orf85Q9H1P6 137 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 HSPB7Q9UBY9 170 aa14.21□□□□□ -0.13
UBXN1-211ENST00000531056 STAB2Q8WWQ8 2551 aa14.21□□□□□ -0.14
UBXN1-211ENST00000531056 PIGBOS1A0A0B4J2F0 54 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 IGHV7-4-1A0A0J9YVY3 117 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 RBMY1BA6NDE4 496 aaKnown RBP14.2□□□□□ -0.14
UBXN1-211ENST00000531056 RBMY1EA6NEQ0 496 aaKnown RBP14.2□□□□□ -0.14
UBXN1-211ENST00000531056 TSPAN4O14817 238 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 TMEM50AO95807 157 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 RBMY1DP0C7P1 496 aaKnown RBP14.2□□□□□ -0.14
UBXN1-211ENST00000531056 VAMP1P23763 118 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 PPP1R1AQ13522 171 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 MLANAQ16655 118 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 OR4X1Q8NH49 305 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 SPAG8Q99932 426 aaPredicted RBP14.2□□□□□ -0.14
UBXN1-211ENST00000531056 SRD5A3Q9H8P0 318 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 ZFAND3Q9H8U3 227 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 SMPXQ9UHP9 88 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 FLVCR2Q9UPI3 526 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 TENM3Q9P273 2699 aa14.2□□□□□ -0.14
UBXN1-211ENST00000531056 A0A1B0GU03 582 aa14.19□□□□□ -0.14
UBXN1-211ENST00000531056 CHEK1O14757 476 aa14.19□□□□□ -0.14
UBXN1-211ENST00000531056 CLN5O75503 358 aa14.19□□□□□ -0.14
UBXN1-211ENST00000531056 YIF1AO95070 293 aa14.19□□□□□ -0.14
UBXN1-211ENST00000531056 SFT2D2O95562 160 aa14.19□□□□□ -0.14
UBXN1-211ENST00000531056 TOMM20LQ6UXN7 152 aa14.19□□□□□ -0.14
UBXN1-211ENST00000531056 ZNF600Q6ZNG1 722 aa14.19□□□□□ -0.14
UBXN1-211ENST00000531056 TMEM116Q8NCL8 245 aa14.19□□□□□ -0.14
UBXN1-211ENST00000531056 NUDT15Q9NV35 164 aa14.19□□□□□ -0.14
UBXN1-211ENST00000531056 TRAV6A0A075B6T7 132 aa14.18□□□□□ -0.14
UBXN1-211ENST00000531056 PITX3O75364 302 aa14.18□□□□□ -0.14
UBXN1-211ENST00000531056 LAMTOR1Q6IAA8 161 aa14.18□□□□□ -0.14
UBXN1-211ENST00000531056 RNASEH2CQ8TDP1 164 aaKnown RBP14.18□□□□□ -0.14
UBXN1-211ENST00000531056 SPATA25Q9BR10 227 aa14.18□□□□□ -0.14
UBXN1-211ENST00000531056 RHPN1-AS1Q9BWJ2 59 aa14.18□□□□□ -0.14
UBXN1-211ENST00000531056 HIPK2Q9H2X6 1198 aa14.18□□□□□ -0.14
UBXN1-211ENST00000531056 RBKSQ9H477 322 aa14.18□□□□□ -0.14
UBXN1-211ENST00000531056 PUS1Q9Y606 427 aaKnown RBP eCLIP14.18□□□□□ -0.14
UBXN1-211ENST00000531056 TRAV14DV4A0A0A6YYC5 116 aa14.17□□□□□ -0.14
UBXN1-211ENST00000531056 RPS10-NUDT3A0A1W2PQS6 291 aa14.17□□□□□ -0.14
UBXN1-211ENST00000531056 H2AFB2P0C5Z0 115 aa14.17□□□□□ -0.14
UBXN1-211ENST00000531056 OR4E1P0C645 316 aa14.17□□□□□ -0.14
UBXN1-211ENST00000531056 ANXA7P20073 488 aaKnown RBP14.17□□□□□ -0.14
UBXN1-211ENST00000531056 NPY1RP25929 384 aa14.17□□□□□ -0.14
UBXN1-211ENST00000531056 C4orf46Q504U0 113 aa14.17□□□□□ -0.14
UBXN1-211ENST00000531056 DTD1Q8TEA8 209 aa14.17□□□□□ -0.14
UBXN1-211ENST00000531056 RNF2Q99496 336 aa14.17□□□□□ -0.14
UBXN1-211ENST00000531056 IGHV3-49A0A0A0MS15 119 aa14.16□□□□□ -0.14
UBXN1-211ENST00000531056 IGKV1-17P01599 117 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms