RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 PRR32B1ATL7 298 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 TIMM23O14925 209 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 TMEM50AO95807 157 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 SRSF1Q07955 248 aaKnown RBP eCLIP7.03□□□□□ -1.281e-7■□□□□ 10.7
CTNND1-227ENST00000530748 WFDC1Q9HC57 220 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 JKAMPQ9P055 326 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 CTAG1AP78358 180 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 FAM166AQ6J272 317 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 NR2C2APQ86WQ0 139 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 TMEM170AQ8WVE7 144 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 GLMPQ8WWB7 406 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 RNASE7Q9H1E1 156 aaKnown RBP7.03□□□□□ -1.28
CTNND1-227ENST00000530748 FOXF2Q12947 444 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 PAQR4Q8N4S7 273 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-227ENST00000530748 PAX8Q06710 450 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 NSUN5P1Q3KNT7 163 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 MBNL3Q9NUK0 354 aaKnown RBP7.03□□□□□ -1.28
CTNND1-227ENST00000530748 MYO9BQ13459 2157 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 TRAV41A0A0B4J266 112 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 CMC4P56277 68 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-227ENST00000530748 TMEM200BQ69YZ2 307 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 A0A087WV48 116 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 EREGO14944 169 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 IFI27P40305 119 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-227ENST00000530748 OSTCQ9NRP0 149 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 PSG8Q9UQ74 426 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 A0A1W2PRE2 83 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 LYNX1G3V0Z9 82 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 LYNX1P0DP58 116 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 Q0VFX4 171 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 LY6DQ14210 128 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 TPTE2P1Q5T6R2 138 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 TRAV40A0A0B4J280 105 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 LY6G6FQ5SQ64 297 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 ZNF319Q9P2F9 582 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 CD55P08174 381 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 PYYP10082 97 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 EFNA4P52798 201 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 EFNB3Q15768 340 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 ZNF585BQ52M93 769 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 C20orf204Q6ZNR8 217 aa7.02□□□□□ -1.29
CTNND1-227ENST00000530748 TMEM178BH3BS89 294 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 MLNRO43193 412 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 IGHV1-8P0DP01 117 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 ZNF672Q499Z4 452 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-227ENST00000530748 MINOS1Q5TGZ0 78 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 GNB1LQ9BYB4 327 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 CHTOPQ9Y3Y2 248 aaKnown RBP7.01□□□□□ -1.29
CTNND1-227ENST00000530748 MINOS1-NBL1R4GNA1 71 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 CASP8AP2Q9UKL3 1982 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 DTX2Q86UW9 622 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 MTURNQ8N3F0 131 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 CHCHD1Q96BP2 118 aaKnown RBP7.01□□□□□ -1.29
CTNND1-227ENST00000530748 PGPEP1LA6NFU8 196 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 F2Z2F3 143 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 CD24P25063 80 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 GAS1P54826 345 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 SRSF3P84103 164 aaKnown RBP7.01□□□□□ -1.29
CTNND1-227ENST00000530748 C17orf82Q86X59 251 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-227ENST00000530748 RNF5Q99942 180 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 SLC25A15Q9Y619 301 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 THSD7BQ9C0I4 1608 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 PTPRZ1P23471 2315 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-227ENST00000530748 IGHV1-3A0A0C4DH29 117 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 M0R1W7 72 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 EFNA2O43921 213 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 ATP5L2Q7Z4Y8 100 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 C10orf126Q8N4M7 172 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 CD177Q8N6Q3 437 aa7.01□□□□□ -1.29
CTNND1-227ENST00000530748 PLXNA3P51805 1871 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 C1QTNF9P0C862 333 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 ORMDL2Q53FV1 153 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 C14orf144Q96I85 54 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 VCX2Q9H322 139 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 PNRC2Q9NPJ4 139 aaKnown RBP7□□□□□ -1.29
CTNND1-227ENST00000530748 TOMM7Q9P0U1 55 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 IGKV1-27A0A075B6S5 117 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 PSCAO43653 123 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 ID3Q02535 119 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 ST6GALNAC6Q969X2 333 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 GAFA1Q96PS6 74 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 PGPEP1Q9NXJ5 209 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 IGKV1-12A0A0C4DH73 117 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 TRBV7-9A0A0J9YWB2 115 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 A0A1B0GV90 55 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 IGKV1D-12P01611 117 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 HBDP02042 147 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 ZNF688P0C7X2 276 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 SLC25A48Q6ZT89 311 aaKnown RBP7□□□□□ -1.29
CTNND1-227ENST00000530748 MDS2Q8NDY4 140 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 SSBP4Q9BWG4 385 aaPredicted RBP7□□□□□ -1.29
CTNND1-227ENST00000530748 IGKV1D-8A0A087WSZ0 117 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 TRBV7-1A0A0A6YYK4 115 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 A0A0G2JNJ9 132 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 OOSP1A8MZH6 123 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 SRRM5B3KS81 715 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 FGF16O43320 207 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 CRPP02741 224 aa7□□□□□ -1.29
CTNND1-227ENST00000530748 ZCCHC24Q8N2G6 241 aaKnown RBP7□□□□□ -1.29
CTNND1-227ENST00000530748 FAM19A2Q8N3H0 131 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms