RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 OR4K15Q8NH41 348 aa3.26□□□□□ -1.89
CSDE1-212ENST00000529046 MRPL30Q8TCC3 161 aaKnown RBP3.26□□□□□ -1.89
CSDE1-212ENST00000529046 NEK7Q8TDX7 302 aa3.26□□□□□ -1.89
CSDE1-212ENST00000529046 DCUN1D4Q92564 292 aa3.26□□□□□ -1.89
CSDE1-212ENST00000529046 PTX4Q96A99 478 aa3.26□□□□□ -1.89
CSDE1-212ENST00000529046 FLYWCH2Q96CP2 140 aaKnown RBP3.26□□□□□ -1.89
CSDE1-212ENST00000529046 DERL3Q96Q80 235 aa3.26□□□□□ -1.89
CSDE1-212ENST00000529046 SULT4A1Q9BR01 284 aa3.26□□□□□ -1.89
CSDE1-212ENST00000529046 TM2D3Q9BRN9 247 aa3.26□□□□□ -1.89
CSDE1-212ENST00000529046 YTHDF1Q9BYJ9 559 aaKnown RBP3.26□□□□□ -1.89
CSDE1-212ENST00000529046 ANKRD60Q9BZ19 345 aa3.26□□□□□ -1.89
CSDE1-212ENST00000529046 TOLLIPQ9H0E2 274 aa3.26□□□□□ -1.89
CSDE1-212ENST00000529046 PEX16Q9Y5Y5 336 aa3.26□□□□□ -1.89
CSDE1-212ENST00000529046 DNAH7Q8WXX0 4024 aa3.26□□□□□ -1.89
CSDE1-212ENST00000529046 IGHV3-43A0A0B4J1X8 118 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 TRAV25A0A0B4J276 109 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 A0A0G2JLM5 398 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 G3V318 75 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 ZNF701M0R085 212 aaPredicted RBP3.25□□□□□ -1.89
CSDE1-212ENST00000529046 SLC22A1O15245 554 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 SERF1AO75920 110 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 IGLV1-51P01701 117 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 IGHV3-23P01764 117 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 MAS1P04201 325 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 HSMCR30P0CW71 290 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 SAA2P0DJI9 122 aaPredicted RBP3.25□□□□□ -1.89
CSDE1-212ENST00000529046 CT45A6P0DMU7 189 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 CT45A5P0DMU8 189 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 CT45A7P0DMV0 189 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 IGHV3-43DP0DP04 118 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 CD40LGP29965 261 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 LGALS7P47929 136 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 WNT4P56705 351 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 RAB25P57735 213 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 LYZP61626 148 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 QRFPP83859 136 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 ST3GAL4Q11206 333 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 LRRC36Q1X8D7 754 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 GLT8D1Q68CQ7 371 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 SBSPONQ8IVN8 264 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 JAGN1Q8N5M9 183 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.25□□□□□ -1.89
CSDE1-212ENST00000529046 OR1L1Q8NH94 360 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 GLYATL2Q8WU03 294 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 MITD1Q8WV92 249 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 MRPL20Q9BYC9 149 aaKnown RBP3.25□□□□□ -1.89
CSDE1-212ENST00000529046 SELENOIQ9C0D9 397 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 IFI27L2Q9H2X8 130 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 FKBP14Q9NWM8 211 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 ABRACLQ9P1F3 81 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 CLEC2DQ9UHP7 191 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 TBC1D24Q9ULP9 559 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 WASHC3Q9Y3C0 194 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 RYR2Q92736 4967 aa3.25□□□□□ -1.89
CSDE1-212ENST00000529046 LCE6AA0A183 80 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 SMCO3A2RU48 225 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 TMEM14DPA8MWL7 114 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 H0Y980 276 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 H0YJW9 148 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 FCN1O00602 326 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 SOX15O60248 233 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 CRTAPO75718 401 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-212ENST00000529046 UCHL1P09936 223 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 ANXA3P12429 323 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 SPNP16150 400 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 SRMP19623 302 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 CELP19835 753 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 ZBTB25P24278 435 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 BLVRBP30043 206 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-212ENST00000529046 PPP1CCP36873 323 aaKnown RBP3.24□□□□□ -1.89
CSDE1-212ENST00000529046 SERPINB10P48595 397 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 PSMD7P51665 324 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 RPL8P62917 257 aaKnown RBP3.24□□□□□ -1.89
CSDE1-212ENST00000529046 EWSR1Q01844 656 aaKnown RBP eCLIP3.24□□□□□ -1.89
CSDE1-212ENST00000529046 TRAM1Q15629 374 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 SSX1Q16384 188 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 ACSM3Q53FZ2 586 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 ACTBL2Q562R1 376 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 LINC00322Q6ZN03 302 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-212ENST00000529046 PPP1R27Q86WC6 154 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 TMEM17Q86X19 198 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 PDPNQ86YL7 162 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 DHRSXQ8N5I4 330 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 OR2K2Q8NGT1 345 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 USMG5Q96IX5 58 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 OR4C12Q96R67 309 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 TSNAXQ99598 290 aaKnown RBP3.24□□□□□ -1.89
CSDE1-212ENST00000529046 TMEM59Q9BXS4 323 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 BANF2Q9H503 90 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 EDA2RQ9HAV5 297 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 ISYNA1Q9NPH2 558 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 PARP11Q9NR21 331 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 PLEKHJ1Q9NW61 149 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 WSB1Q9Y6I7 421 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 STAB2Q8WWQ8 2551 aa3.24□□□□□ -1.89
CSDE1-212ENST00000529046 MYL12BO14950 172 aa3.23□□□□□ -1.89
CSDE1-212ENST00000529046 AIREO43918 545 aa3.23□□□□□ -1.89
CSDE1-212ENST00000529046 OR2A4O95047 310 aa3.23□□□□□ -1.89
CSDE1-212ENST00000529046 STAG3L2P0CL84 134 aa3.23□□□□□ -1.89
CSDE1-212ENST00000529046 PSMA1P25786 263 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms