RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 FLYWCH2Q96CP2 140 aaKnown RBP3.5□□□□□ -1.85
USP48-211ENST00000526044 CXorf58Q96LI9 332 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 RNF5Q99942 180 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 MARVELD1Q9BSK0 173 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 MRPL20Q9BYC9 149 aaKnown RBP3.5□□□□□ -1.85
USP48-211ENST00000526044 GFRA4Q9GZZ7 299 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 C20orf85Q9H1P6 137 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 NAA60Q9H7X0 242 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 BEX1Q9HBH7 125 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 SLC2A9Q9NRM0 540 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 WDR83OSQ9Y284 106 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 WASHC3Q9Y3C0 194 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 TMED3Q9Y3Q3 217 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 ITPR2Q14571 2701 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 HECTD1Q9ULT8 2610 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 ABCA2Q9BZC7 2435 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 ABCA12Q86UK0 2595 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 VPS13CQ709C8 3753 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 ABCA1O95477 2261 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 POLQO75417 2590 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 IGHV4-4A0A075B6R2 117 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 A0A087X002 238 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 IGHV3-72A0A0B4J1Y9 119 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 PIGBOS1A0A0B4J2F0 54 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 MDFIC2A0A1B0GVS7 189 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 C9orf170A2RU37 121 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 CRYM-AS1A6NIL9 109 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 PCP4L1A6NKN8 68 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 NCBP2LA6PVI3 153 aaKnown RBP3.49□□□□□ -1.85
USP48-211ENST00000526044 H0Y980 276 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 H0YJW9 148 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 NBR2O15453 112 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 RAMP3O60896 148 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 CRLF1O75462 422 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 CLN5O75503 358 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 ATG12O94817 140 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 SFT2D2O95562 160 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 CDS2O95674 445 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 HPRT1P00492 218 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 MOSP00540 346 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 HRASP01112 189 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 IGKV1D-33P01593 117 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 IGKV1-33P01594 117 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 IL5P05113 134 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 SERPINE2P07093 398 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 CRYGBP07316 175 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 LGALS7P47929 136 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 RAB9AP51151 201 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 DYNLT3P51808 116 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 RAB25P57735 213 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 UBE2MP61081 183 aaKnown RBP3.49□□□□□ -1.85
USP48-211ENST00000526044 B2MP61769 119 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 SUPT4H1P63272 117 aaKnown RBP3.49□□□□□ -1.85
USP48-211ENST00000526044 EBI3Q14213 229 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 OXA1LQ15070 435 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 SLC9A3R2Q15599 337 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 TATDN3Q17R31 274 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 LRRC75BQ2VPJ9 315 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 TRIM16LQ309B1 348 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 OR2B11Q5JQS5 317 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 LYG2Q86SG7 212 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 PDPNQ86YL7 162 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 ZNF695Q8IW36 515 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 SIGLECL1Q8N7X8 197 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 THAP8Q8NA92 274 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 OR4C13Q8NGP0 309 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 PIFOQ8TCI5 191 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 ZNF418Q8TF45 676 aaPredicted RBP3.49□□□□□ -1.85
USP48-211ENST00000526044 SSMEM1Q8WWF3 244 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 TMEM230Q96A57 120 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 GALNT14Q96FL9 552 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 TP53RKQ96S44 253 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 TSNAXQ99598 290 aaKnown RBP3.49□□□□□ -1.85
USP48-211ENST00000526044 HINT2Q9BX68 163 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 PITPNC1Q9UKF7 332 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 CSDC2Q9Y534 153 aaKnown RBP3.49□□□□□ -1.85
USP48-211ENST00000526044 AKAP9Q99996 3911 aa3.49□□□□□ -1.85
USP48-211ENST00000526044 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.49□□□□□ -1.858e-7■■■□□ 17.1
USP48-211ENST00000526044 ASH1LQ9NR48 2969 aaKnown RBP3.48□□□□□ -1.85
USP48-211ENST00000526044 UNC79Q9P2D8 2635 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 NAV2Q8IVL1 2488 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 A0A087WW49 117 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 A0A0B4J2A0 478 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 A6NDX4 124 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 SRRM4A7MD48 611 aaKnown RBP3.48□□□□□ -1.85
USP48-211ENST00000526044 SNRPGP15A8MWD9 76 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 H3BUX3 64 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 CCL24O00175 119 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 RBFOX2O43251 390 aaKnown RBP eCLIP3.48□□□□□ -1.85
USP48-211ENST00000526044 CREBL2O60519 120 aaPredicted RBP3.48□□□□□ -1.85
USP48-211ENST00000526044 VENTXO95231 258 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 DUS4LO95620 317 aaKnown RBP3.48□□□□□ -1.85
USP48-211ENST00000526044 CRYZL1O95825 349 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 KRASP01116 189 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 HLA-AP01891 365 aaKnown RBP3.48□□□□□ -1.85
USP48-211ENST00000526044 IGKV1-16P04430 117 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 OR5AC1P0C628 307 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 NQO2P16083 231 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 G6PCP35575 357 aa3.48□□□□□ -1.85
USP48-211ENST00000526044 ERVK-16P61578 105 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms