RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 GPHB5Q86YW7 130 aa15.92■□□□□ 0.14
CD44-222ENST00000526025 OR4X1Q8NH49 305 aa15.92■□□□□ 0.14
CD44-222ENST00000526025 DCUN1D4Q92564 292 aa15.92■□□□□ 0.14
CD44-222ENST00000526025 GPR61Q9BZJ8 451 aa15.92■□□□□ 0.14
CD44-222ENST00000526025 STRAPQ9Y3F4 350 aaKnown RBP15.92■□□□□ 0.14
CD44-222ENST00000526025 IGHV3-21A0A0B4J1V1 117 aa15.91■□□□□ 0.14
CD44-222ENST00000526025 PPP5D1E7EU14 171 aa15.91■□□□□ 0.14
CD44-222ENST00000526025 OVOL1O14753 267 aa15.91■□□□□ 0.14
CD44-222ENST00000526025 H2BFSP57053 126 aa15.91■□□□□ 0.14
CD44-222ENST00000526025 CD69Q07108 199 aa15.91■□□□□ 0.14
CD44-222ENST00000526025 Q56UQ5 140 aa15.91■□□□□ 0.14
CD44-222ENST00000526025 C1QL4Q86Z23 238 aa15.91■□□□□ 0.14
CD44-222ENST00000526025 CACNG8Q8WXS5 425 aa15.91■□□□□ 0.14
CD44-222ENST00000526025 DLX4Q92988 240 aaPredicted RBP15.91■□□□□ 0.14
CD44-222ENST00000526025 OR4C12Q96R67 309 aa15.91■□□□□ 0.14
CD44-222ENST00000526025 PSENENQ9NZ42 101 aa15.91■□□□□ 0.14
CD44-222ENST00000526025 LGALS9O00182 355 aa15.9■□□□□ 0.14
CD44-222ENST00000526025 SCGB2A1O75556 95 aa15.9■□□□□ 0.14
CD44-222ENST00000526025 TMEM50AO95807 157 aa15.9■□□□□ 0.14
CD44-222ENST00000526025 IFNA4P05014 189 aa15.9■□□□□ 0.14
CD44-222ENST00000526025 PAX9P55771 341 aa15.9■□□□□ 0.14
CD44-222ENST00000526025 SPANXN5Q5MJ07 72 aa15.9■□□□□ 0.14
CD44-222ENST00000526025 ACSM6Q6P461 480 aa15.9■□□□□ 0.14
CD44-222ENST00000526025 TMEM116Q8NCL8 245 aa15.9■□□□□ 0.14
CD44-222ENST00000526025 C11orf1Q9H5F2 150 aa15.9■□□□□ 0.14
CD44-222ENST00000526025 MGAT4CQ9UBM8 478 aa15.9■□□□□ 0.14
CD44-222ENST00000526025 OR2T8A6NH00 312 aa15.89■□□□□ 0.13
CD44-222ENST00000526025 CLN5O75503 358 aa15.89■□□□□ 0.13
CD44-222ENST00000526025 SIX6O95475 246 aa15.89■□□□□ 0.13
CD44-222ENST00000526025 CTSGP08311 255 aa15.89■□□□□ 0.13
CD44-222ENST00000526025 PVALBP20472 110 aaPredicted RBP15.89■□□□□ 0.13
CD44-222ENST00000526025 TMEM14EPQ6UXP3 125 aa15.89■□□□□ 0.13
CD44-222ENST00000526025 REC114Q7Z4M0 266 aa15.89■□□□□ 0.13
CD44-222ENST00000526025 ZNF436Q9C0F3 470 aaPredicted RBP15.89■□□□□ 0.13
CD44-222ENST00000526025 MED28Q9H204 178 aa15.89■□□□□ 0.13
CD44-222ENST00000526025 TRAV30A0A087WSZ9 112 aa15.88■□□□□ 0.13
CD44-222ENST00000526025 PRSS46E5RG02 174 aa15.88■□□□□ 0.13
CD44-222ENST00000526025 NUPL2O15504 423 aaKnown RBP15.88■□□□□ 0.13
CD44-222ENST00000526025 WIPF1O43516 503 aa15.88■□□□□ 0.13
CD44-222ENST00000526025 GNG7O60262 68 aa15.88■□□□□ 0.13
CD44-222ENST00000526025 SCAF4O95104 1147 aaKnown RBP15.88■□□□□ 0.13
CD44-222ENST00000526025 ADMP35318 185 aa15.88■□□□□ 0.13
CD44-222ENST00000526025 RAB32Q13637 225 aa15.88■□□□□ 0.13
CD44-222ENST00000526025 FAM106AQ4KMX7 169 aa15.88■□□□□ 0.13
CD44-222ENST00000526025 PRSS54Q6PEW0 395 aa15.88■□□□□ 0.13
CD44-222ENST00000526025 SLC16A13Q7RTY0 426 aa15.88■□□□□ 0.13
CD44-222ENST00000526025 UBAC2Q8NBM4 344 aa15.88■□□□□ 0.13
CD44-222ENST00000526025 ASB13Q8WXK3 278 aa15.88■□□□□ 0.13
CD44-222ENST00000526025 LSM5Q9Y4Y9 91 aaKnown RBP15.88■□□□□ 0.13
CD44-222ENST00000526025 NBEAL1Q6ZS30 2694 aa15.87■□□□□ 0.13
CD44-222ENST00000526025 H3BP45 60 aa15.87■□□□□ 0.13
CD44-222ENST00000526025 L7N2F9 121 aa15.87■□□□□ 0.13
CD44-222ENST00000526025 INSL3P51460 131 aa15.87■□□□□ 0.13
CD44-222ENST00000526025 SYNJ2BPP57105 145 aa15.87■□□□□ 0.13
CD44-222ENST00000526025 S100A10P60903 97 aa15.87■□□□□ 0.13
CD44-222ENST00000526025 VAMP2P63027 116 aa15.87■□□□□ 0.13
CD44-222ENST00000526025 RELQ04864 619 aaPredicted RBP15.87■□□□□ 0.13
CD44-222ENST00000526025 OR9G4Q8NGQ1 327 aa15.87■□□□□ 0.13
CD44-222ENST00000526025 CHRDL1Q9BU40 450 aa15.87■□□□□ 0.13
CD44-222ENST00000526025 PEMTQ9UBM1 199 aa15.87■□□□□ 0.13
CD44-222ENST00000526025 A8MWP6 167 aa15.86■□□□□ 0.13
CD44-222ENST00000526025 DEDDO75618 318 aa15.86■□□□□ 0.13
CD44-222ENST00000526025 OR2C1O95371 312 aa15.86■□□□□ 0.13
CD44-222ENST00000526025 IGHV3-48P01763 117 aa15.86■□□□□ 0.13
CD44-222ENST00000526025 MLANAQ16655 118 aa15.86■□□□□ 0.13
CD44-222ENST00000526025 C9orf66Q5T8R8 295 aa15.86■□□□□ 0.13
CD44-222ENST00000526025 SAMD5Q5TGI4 173 aa15.86■□□□□ 0.13
CD44-222ENST00000526025 ELOVL1Q9BW60 279 aa15.86■□□□□ 0.13
CD44-222ENST00000526025 MRPL36Q9P0J6 103 aaKnown RBP15.86■□□□□ 0.13
CD44-222ENST00000526025 PMS2P5A8MQ11 134 aa15.85■□□□□ 0.13
CD44-222ENST00000526025 NDUFA4O00483 81 aa15.85■□□□□ 0.13
CD44-222ENST00000526025 PET100P0DJ07 73 aa15.85■□□□□ 0.13
CD44-222ENST00000526025 RND2P52198 227 aa15.85■□□□□ 0.13
CD44-222ENST00000526025 ELLP55199 621 aaPredicted RBP15.85■□□□□ 0.13
CD44-222ENST00000526025 RRAS2P62070 204 aaPredicted RBP15.85■□□□□ 0.13
CD44-222ENST00000526025 OR1S2Q8NGQ3 325 aa15.85■□□□□ 0.13
CD44-222ENST00000526025 SLC35E1Q96K37 410 aa15.85■□□□□ 0.13
CD44-222ENST00000526025 LYRM2Q9NU23 88 aaPredicted RBP15.85■□□□□ 0.13
CD44-222ENST00000526025 SIGLEC8Q9NYZ4 499 aa15.85■□□□□ 0.13
CD44-222ENST00000526025 PAIP2BQ9ULR5 123 aaKnown RBP15.85■□□□□ 0.13
CD44-222ENST00000526025 SEC14L6B5MCN3 397 aa15.84■□□□□ 0.13
CD44-222ENST00000526025 FNDC10F2Z333 226 aa15.84■□□□□ 0.13
CD44-222ENST00000526025 RLN2P04090 185 aa15.84■□□□□ 0.13
CD44-222ENST00000526025 IGLL1P15814 213 aa15.84■□□□□ 0.13
CD44-222ENST00000526025 CXCL3P19876 107 aa15.84■□□□□ 0.13
CD44-222ENST00000526025 FCN2Q15485 313 aa15.84■□□□□ 0.13
CD44-222ENST00000526025 OR11H7Q8NGC8 314 aa15.84■□□□□ 0.13
CD44-222ENST00000526025 PPP1R1CQ8WVI7 109 aa15.84■□□□□ 0.13
CD44-222ENST00000526025 TMEM190Q8WZ59 177 aa15.84■□□□□ 0.13
CD44-222ENST00000526025 NOTCH1P46531 2555 aa15.84■□□□□ 0.13
CD44-222ENST00000526025 IGLC1P0CG04 106 aa15.83■□□□□ 0.12
CD44-222ENST00000526025 GAMTQ14353 236 aa15.83■□□□□ 0.12
CD44-222ENST00000526025 ZNF414Q96IQ9 312 aa15.83■□□□□ 0.12
CD44-222ENST00000526025 GGACTQ9BVM4 153 aa15.83■□□□□ 0.12
CD44-222ENST00000526025 ZC4H2Q9NQZ6 224 aa15.83■□□□□ 0.12
CD44-222ENST00000526025 E5RGE8 158 aa15.82■□□□□ 0.12
CD44-222ENST00000526025 IGKV1-17P01599 117 aa15.82■□□□□ 0.12
CD44-222ENST00000526025 YPEL3P61236 119 aaPredicted RBP15.82■□□□□ 0.12
CD44-222ENST00000526025 DLK1P80370 383 aa15.82■□□□□ 0.12
CD44-222ENST00000526025 IL34Q6ZMJ4 242 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms