RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 IGHV3-53P01767 116 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 C1QAP02745 245 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 KLF3P57682 345 aaPredicted RBP3.45□□□□□ -1.86
USP47-204ENST00000525078 EIF5AP63241 154 aaKnown RBP3.45□□□□□ -1.86
USP47-204ENST00000525078 OR8I2Q8N0Y5 310 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 RPRMLQ8N4K4 120 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 OR51T1Q8NGJ9 327 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 CANT1Q8WVQ1 401 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 SLC25A21Q9BQT8 299 aaPredicted RBP3.45□□□□□ -1.86
USP47-204ENST00000525078 MIEN1Q9BRT3 115 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 YIPF3Q9GZM5 350 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 SMDT1Q9H4I9 107 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 IBTKQ9P2D0 1353 aaPredicted RBP3.45□□□□□ -1.86
USP47-204ENST00000525078 UHRF1BP1LA0JNW5 1464 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 NLRP1Q9C000 1473 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 EIF4G3O43432 1585 aaKnown RBP3.45□□□□□ -1.86
USP47-204ENST00000525078 IQGAP2Q13576 1575 aa3.45□□□□□ -1.86
USP47-204ENST00000525078 CCDC171Q6TFL3 1326 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 BCL9O00512 1426 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 KDM6BO15054 1643 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 SCN1AP35498 2009 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 ABCC10Q5T3U5 1492 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 IRGMA1A4Y4 181 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 TLCD2A6NGC4 264 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 OR2T1O43869 369 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 CDS2O95674 445 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 NPYP01303 97 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 MT3P25713 68 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 PLCXD2Q0VAA5 305 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 LINC00483Q53H64 154 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 TMEM69Q5SWH9 247 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 OR8D4Q8NGM9 314 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 SLAMF6Q96DU3 332 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 ZNF285Q96NJ3 590 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 OR2H1Q9GZK4 316 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 POPDC3Q9HBV1 291 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 PRDM15P57071 1507 aaPredicted RBP3.44□□□□□ -1.86
USP47-204ENST00000525078 KIAA1107Q9UPP5 1409 aa3.44□□□□□ -1.86
USP47-204ENST00000525078 ADAMTSL1Q8N6G6 1762 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 PZPP20742 1482 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 DSCAMO60469 2012 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 IGKV1D-37A0A075B6S9 117 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 ZNF98A6NK75 572 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 GABARAPH6UMI1 98 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 OVOL1O14753 267 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 GGCTO75223 188 aaKnown RBP3.43□□□□□ -1.86
USP47-204ENST00000525078 SOD1P00441 154 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 MPC1LP0DKB6 136 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 MUC1P15941 1255 aaPredicted RBP3.43□□□□□ -1.86
USP47-204ENST00000525078 INSL3P51460 131 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 C2orf83Q53S99 150 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 DNLZQ5SXM8 178 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 C10orf126Q8N4M7 172 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 TSTD1Q8NFU3 115 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 OR52R1Q8NGF1 315 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 OR4C16Q8NGL9 310 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 CLDND2Q8NHS1 167 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 STAG3L4Q8TBR4 150 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 CARD19Q96LW7 228 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 GINS4Q9BRT9 223 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 OR8D2Q9GZM6 311 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 OSTCQ9NRP0 149 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 ASF1BQ9NVP2 202 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 CDC42BPBQ9Y5S2 1711 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 ATG2BQ96BY7 2078 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 MAGI3Q5TCQ9 1506 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 PTPRGP23470 1445 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 DAPK1P53355 1430 aa3.43□□□□□ -1.86
USP47-204ENST00000525078 DOCK9Q9BZ29 2069 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 A0A087X0T9 212 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 A0A1B0GV90 55 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 CCDC160A6NGH7 325 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 C9JAW5 83 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 H7BYZ3 331 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 K7EP13 123 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 TNFSF15O95150 251 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 CGAP01215 116 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 IGHV3-7P01780 117 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 APOC1P02654 83 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 C1QCP02747 245 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 LGALS3P17931 250 aaKnown RBP3.42□□□□□ -1.86
USP47-204ENST00000525078 MDKP21741 143 aaPredicted RBP3.42□□□□□ -1.86
USP47-204ENST00000525078 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
USP47-204ENST00000525078 PSG9Q00887 426 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 BIKQ13323 160 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 EIF3IQ13347 325 aaKnown RBP3.42□□□□□ -1.86
USP47-204ENST00000525078 MIAQ16674 131 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 LINC01554Q52M75 96 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 C1orf140Q5VVS0 124 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 ZNF695Q8IW36 515 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 TCTE3Q8IZS6 198 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 HIST3H2BBQ8N257 126 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 KLF14Q8TD94 323 aaPredicted RBP3.42□□□□□ -1.86
USP47-204ENST00000525078 SMCR5Q8TEV8 140 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 DCANP1Q8TF63 244 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 TEX37Q96LM6 180 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 HIGD1AQ9Y241 93 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 LAMC3Q9Y6N6 1575 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms