RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ATP6V1FQ16864 119 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 C9orf62Q8N4C0 152 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 KCNRGQ8N5I3 272 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 CACNG8Q8WXS5 425 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 USMG5Q96IX5 58 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 CXorf58Q96LI9 332 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 GGACTQ9BVM4 153 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 KLK15Q9H2R5 256 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 A0A0G2JLM5 398 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 MFSD2BA6NFX1 497 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 DFFBO76075 338 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 RPLP1P05386 114 aaKnown RBP12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 PROK1P58294 105 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 AKR1C1Q04828 323 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 MLANAQ16655 118 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 ACSM6Q6P461 480 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 VN1R17PQ8TDU5 208 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 SCARB1Q8WTV0 552 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 EEF1AKMT3Q96AZ1 226 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 ACY3Q96HD9 319 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 ATP5SQ99766 215 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 TMEM147Q9BVK8 224 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 ARL6Q9H0F7 186 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 UQCC1Q9NVA1 299 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 S4R3C0 116 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 JMJD1CQ15652 2540 aa12.33□□□□□ -0.44
TSPAN4-213ENST00000524895 UBE2L5PA0A1B0GUS4 154 aa12.32□□□□□ -0.44
TSPAN4-213ENST00000524895 KANTRA0A1W2PQU2 76 aa12.32□□□□□ -0.44
TSPAN4-213ENST00000524895 LGALSLQ3ZCW2 172 aaPredicted RBP12.32□□□□□ -0.44
TSPAN4-213ENST00000524895 TMUB2Q71RG4 321 aa12.32□□□□□ -0.44
TSPAN4-213ENST00000524895 RNF152Q8N8N0 203 aa12.32□□□□□ -0.44
TSPAN4-213ENST00000524895 UBAC2Q8NBM4 344 aa12.32□□□□□ -0.44
TSPAN4-213ENST00000524895 WIPF2Q8TF74 440 aaPredicted RBP12.32□□□□□ -0.44
TSPAN4-213ENST00000524895 ARPC5LQ9BPX5 153 aa12.32□□□□□ -0.44
TSPAN4-213ENST00000524895 C21orf62Q9NYP8 219 aa12.32□□□□□ -0.44
TSPAN4-213ENST00000524895 C2CD3Q4AC94 2353 aa12.32□□□□□ -0.44
TSPAN4-213ENST00000524895 FNDC10F2Z333 226 aa12.31□□□□□ -0.44
TSPAN4-213ENST00000524895 TAAR5O14804 337 aa12.31□□□□□ -0.44
TSPAN4-213ENST00000524895 BCL2L11O43521 198 aa12.31□□□□□ -0.44
TSPAN4-213ENST00000524895 IGHV3-23P01764 117 aa12.31□□□□□ -0.44
TSPAN4-213ENST00000524895 RND2P52198 227 aa12.31□□□□□ -0.44
TSPAN4-213ENST00000524895 MFAP4P55083 255 aa12.31□□□□□ -0.44
TSPAN4-213ENST00000524895 GAMTQ14353 236 aa12.31□□□□□ -0.44
TSPAN4-213ENST00000524895 KRTAP24-1Q3LI83 254 aa12.31□□□□□ -0.44
TSPAN4-213ENST00000524895 Q56UQ5 140 aa12.31□□□□□ -0.44
TSPAN4-213ENST00000524895 KHDC1LQ5JSQ8 128 aa12.31□□□□□ -0.44
TSPAN4-213ENST00000524895 SETD2Q9BYW2 2564 aaPredicted RBP12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 TRBV7-1A0A0A6YYK4 115 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 IFNA5P01569 189 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 IGHV3-11P01762 117 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 C4BPBP20851 252 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 NPBWR1P48145 328 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 ZNF266Q14584 549 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 VWC2Q2TAL6 325 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 LAMTOR1Q6IAA8 161 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 OR4X1Q8NH49 305 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 ZNF502Q8TBZ5 544 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 MYOZ3Q8TDC0 251 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 NPIPB3Q92617 1050 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 WFDC1Q9HC57 220 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 NPVFQ9HCQ7 196 aa12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 MRPL36Q9P0J6 103 aaKnown RBP12.3□□□□□ -0.44
TSPAN4-213ENST00000524895 BORCS7-ASMTA0A0B4J1R7 106 aa12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 GNG7O60262 68 aa12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 SCGB2A1O75556 95 aa12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 CD28P10747 220 aa12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 LURAP1LQ8IV03 231 aa12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 ZNF491Q8N8L2 437 aa12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 C11orf44Q8N8P7 122 aa12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 TMEM116Q8NCL8 245 aa12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 UBE2E2Q96LR5 201 aa12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 TXN2Q99757 166 aa12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 GAR1Q9NY12 217 aaKnown RBP12.29□□□□□ -0.44
TSPAN4-213ENST00000524895 TCRBV4S1A1TA0A5B7 111 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 ZFP92A6NM28 416 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 CLN5O75503 358 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 FGF7P21781 194 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 FCGR2BP31994 310 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 GPR183P32249 361 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 KIAA0141Q14154 515 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 AWAT1Q58HT5 328 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 RPL7L1Q6DKI1 246 aaKnown RBP12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 TEPPQ6URK8 271 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 TREML4Q6UXN2 200 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 CLEC19AQ6UXS0 136 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 TMEM144Q7Z5S9 345 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 SCGB1C1Q8TD33 95 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 CCDC140Q96MF4 163 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 OR5B12Q96R08 314 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 C19orf24Q9BVV8 132 aa12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 ZNF471Q9BX82 626 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-213ENST00000524895 OR2T8A6NH00 312 aa12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 JTBO76095 146 aa12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 LGALS1P09382 135 aaKnown RBP12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 OR10J1P30954 320 aa12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 OPCMLQ14982 345 aa12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 FAM209BQ5JX69 171 aa12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 ZNF343Q6P1L6 599 aa12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 BTNL8Q6UX41 500 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms