RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 RNF5Q99942 180 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 CMSS1Q9BQ75 279 aaKnown RBP3.49□□□□□ -1.85
SKP1-213ENST00000524288 EMC6Q9BV81 110 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 SYT4Q9H2B2 425 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 SMDT1Q9H4I9 107 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 RHOFQ9HBH0 211 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 UBQLN4Q9NRR5 601 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 CACFD1Q9UGQ2 172 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 SLC22A13Q9Y226 551 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 RFNGQ9Y644 331 aa3.49□□□□□ -1.85
SKP1-213ENST00000524288 CACNA1CQ13936 2221 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 CEP192Q8TEP8 1941 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 PDE4DIPQ5VU43 2346 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 TRAV8-4A0A0B4J246 113 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 IGHV7-4-1A0A0J9YVY3 117 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 ZNF729A6NN14 1252 aaPredicted RBP3.48□□□□□ -1.85
SKP1-213ENST00000524288 FTCDNL1E5RQL4 147 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 RNASEK-C17orf49H0YIS7 233 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 RPL36A-HNRNPH2H7BZ11 118 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 H7C1C5 153 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 RRP8O43159 456 aaKnown RBP3.48□□□□□ -1.85
SKP1-213ENST00000524288 SGCEO43556 437 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 OR2T1O43869 369 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 NSA2O95478 260 aaKnown RBP3.48□□□□□ -1.85
SKP1-213ENST00000524288 CST4P01036 141 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 P01737 135 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 SLC2A1P11166 492 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 CTLA4P16410 223 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 CCL1P22362 96 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 CXCR1P25024 350 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 CRABP1P29762 137 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 GABRA4P48169 554 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 DNASE1L1P49184 302 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 RAB5CP51148 216 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 TAS2R60P59551 318 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 LCN6P62502 163 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 SUPT4H1P63272 117 aaKnown RBP3.48□□□□□ -1.85
SKP1-213ENST00000524288 Q3ZCU0 254 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 OR10K2Q6IF99 312 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 DNM1P34Q6PK57 102 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 SLC26A10Q8NG04 563 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 OR51A2Q8NGJ7 313 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 OR8S1Q8NH09 359 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 TERB2Q8NHR7 220 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 SULT4A1Q9BR01 284 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 ADAT1Q9BUB4 502 aaKnown RBP3.48□□□□□ -1.85
SKP1-213ENST00000524288 SFXN3Q9BWM7 321 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 ULBP3Q9BZM4 244 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 LPAR5Q9H1C0 372 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 TREM1Q9NP99 234 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 PRTFDC1Q9NRG1 225 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 NECAP2Q9NVZ3 263 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 FAM206AQ9NX38 181 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 OR52A1Q9UKL2 312 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 ZNF835Q9Y2P0 537 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 MMACHCQ9Y4U1 282 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 RP1P56715 2156 aa3.48□□□□□ -1.85
SKP1-213ENST00000524288 NCOA6Q14686 2063 aaPredicted RBP3.47□□□□□ -1.85
SKP1-213ENST00000524288 A0A087WWC5 75 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 IGKV3D-11A0A0A0MRZ8 115 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 IGHV2OR16-5A0A0B4J2B6 119 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 FAM240AA0A1B0GVK7 77 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 EEF1E1-BLOC1S5C9J1V9 151 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 C9JQL5 133 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 J3QT63 122 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 PLPP3O14495 311 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 DEDDO75618 318 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 IGLV2-8P01709 118 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 IGLV3-1P01715 115 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 TTRP02766 147 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 SEC11BP0C7V7 166 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 HIST1H1DP16402 221 aaKnown RBP3.47□□□□□ -1.85
SKP1-213ENST00000524288 ZNF708P17019 499 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 NFYBP25208 207 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 HOXA6P31267 233 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 ARR3P36575 388 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 SNCAP37840 140 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 ACTR1BP42025 376 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 POLR2HP52434 150 aaKnown RBP3.47□□□□□ -1.85
SKP1-213ENST00000524288 CMC4P56277 68 aaPredicted RBP3.47□□□□□ -1.85
SKP1-213ENST00000524288 GLO1Q04760 184 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 EIF4EBP1Q13541 118 aaPredicted RBP3.47□□□□□ -1.85
SKP1-213ENST00000524288 SCGB2B2Q4G0G5 96 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 AADACL3Q5VUY0 350 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 C1orf140Q5VVS0 124 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 CLEC18BQ6UXF7 455 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 TMPPEQ6ZT21 453 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 HIST2H3AQ71DI3 136 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 GKN2Q86XP6 184 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 OR5AS1Q8N127 324 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 ZCCHC24Q8N2G6 241 aaKnown RBP3.47□□□□□ -1.85
SKP1-213ENST00000524288 LRRC18Q8N456 261 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 ACBD4Q8NC06 268 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 LFNGQ8NES3 379 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 OR4S1Q8NGB4 309 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 OR13G1Q8NGZ3 307 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 OR4K15Q8NH41 348 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 ZNF563Q8TA94 476 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 DOK4Q8TEW6 326 aa3.47□□□□□ -1.85
SKP1-213ENST00000524288 S100PBPQ96BU1 408 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms