RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 C1orf158Q8N1D5 194 aa12.1□□□□□ -0.47
PVT1-220ENST00000524165 ZNF709Q8N972 641 aa12.1□□□□□ -0.47
PVT1-220ENST00000524165 RNF141Q8WVD5 230 aa12.1□□□□□ -0.47
PVT1-220ENST00000524165 U3KQE9 123 aa12.1□□□□□ -0.47
PVT1-220ENST00000524165 CDNFQ49AH0 187 aa12.09□□□□□ -0.47
PVT1-220ENST00000524165 C16orf54Q6UWD8 224 aa12.09□□□□□ -0.47
PVT1-220ENST00000524165 GLMPQ8WWB7 406 aa12.09□□□□□ -0.47
PVT1-220ENST00000524165 C7orf50Q9BRJ6 194 aaKnown RBP12.09□□□□□ -0.47
PVT1-220ENST00000524165 SLC5A7Q9GZV3 580 aa12.09□□□□□ -0.47
PVT1-220ENST00000524165 ZNF586Q9NXT0 402 aa12.09□□□□□ -0.47
PVT1-220ENST00000524165 PSORS1C1Q9UIG5 152 aa12.09□□□□□ -0.47
PVT1-220ENST00000524165 DBX1A6NMT0 343 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 CIB2O75838 187 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 KRASP01116 189 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 PPYP01298 95 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 IGKV3-20P01619 116 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 FCGR2CP31995 323 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 LINC00315P59091 139 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 GDF5OSQ5U4N7 250 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 AADACL3Q5VUY0 350 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 ZFP1Q6P2D0 407 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 AHSA2Q719I0 299 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 TMEM203Q969S6 136 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 MND1Q9BWT6 205 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 NRN1Q9NPD7 142 aa12.08□□□□□ -0.48
PVT1-220ENST00000524165 ATP8B1O43520 1251 aa12.07□□□□□ -0.48
PVT1-220ENST00000524165 ATP5G1P05496 136 aa12.07□□□□□ -0.48
PVT1-220ENST00000524165 ATP5G3P48201 142 aa12.07□□□□□ -0.48
PVT1-220ENST00000524165 RASSF2P50749 326 aa12.07□□□□□ -0.48
PVT1-220ENST00000524165 ZNF818PQ6ZRF7 136 aa12.07□□□□□ -0.48
PVT1-220ENST00000524165 TMEM230Q96A57 120 aa12.07□□□□□ -0.48
PVT1-220ENST00000524165 TSC22D3Q99576 134 aa12.07□□□□□ -0.48
PVT1-220ENST00000524165 DEFB130BP0DP73 79 aa12.06□□□□□ -0.48
PVT1-220ENST00000524165 DEFB130AP0DP74 79 aa12.06□□□□□ -0.48
PVT1-220ENST00000524165 F2RP25116 425 aa12.06□□□□□ -0.48
PVT1-220ENST00000524165 CALRP27797 417 aaKnown RBP12.06□□□□□ -0.48
PVT1-220ENST00000524165 G6PCP35575 357 aa12.06□□□□□ -0.48
PVT1-220ENST00000524165 NUDCD2Q8WVJ2 157 aa12.06□□□□□ -0.48
PVT1-220ENST00000524165 ATG5Q9H1Y0 275 aa12.06□□□□□ -0.48
PVT1-220ENST00000524165 SAV1Q9H4B6 383 aaPredicted RBP12.06□□□□□ -0.48
PVT1-220ENST00000524165 SPHARQ15513 63 aa12.05□□□□□ -0.48
PVT1-220ENST00000524165 RNASE12Q5GAN4 147 aaKnown RBP12.05□□□□□ -0.48
PVT1-220ENST00000524165 SLC35B3Q9H1N7 401 aa12.05□□□□□ -0.48
PVT1-220ENST00000524165 PLCXD1Q9NUJ7 323 aa12.05□□□□□ -0.48
PVT1-220ENST00000524165 CLN5O75503 358 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 SCGB2A1O75556 95 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 GCSHP23434 173 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 LPAR6P43657 344 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 ERHP84090 104 aaKnown RBP12.04□□□□□ -0.48
PVT1-220ENST00000524165 PRCDQ00LT1 54 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 TRAM1Q15629 374 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 TMEM69Q5SWH9 247 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 FOXI2Q6ZQN5 318 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 LGALS14Q8TCE9 139 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 FCAMRQ8WWV6 532 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 UFD1Q92890 307 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 BORCS5Q969J3 196 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 MAGT1Q9H0U3 335 aa12.04□□□□□ -0.48
PVT1-220ENST00000524165 LSM2Q9Y333 95 aaKnown RBP12.04□□□□□ -0.48
PVT1-220ENST00000524165 CBY3A6NI87 242 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 SSX5O60225 188 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 HNRNPCP07910 306 aaKnown RBP eCLIP12.03□□□□□ -0.486e-7■□□□□ 9.7
PVT1-220ENST00000524165 FXYD4P59646 89 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 GNG2P59768 71 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 PSG9Q00887 426 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 ZNF79Q15937 498 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 SPATA31B1PQ5VZV4 182 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 LAIR2Q6ISS4 152 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 OR4B1Q8NGF8 309 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 DEFB104AQ8WTQ1 72 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 UHRF2Q96PU4 802 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 FKBP14Q9NWM8 211 aa12.03□□□□□ -0.48
PVT1-220ENST00000524165 MRPS16Q9Y3D3 137 aaKnown RBP12.03□□□□□ -0.48
PVT1-220ENST00000524165 LRP1Q07954 4544 aaKnown RBP12.02□□□□□ -0.48
PVT1-220ENST00000524165 TMEM235A6NFC5 223 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 IFITM5A6NNB3 132 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 PTHLHP12272 177 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 PSMA1P25786 263 aaKnown RBP12.02□□□□□ -0.49
PVT1-220ENST00000524165 DEFB1P60022 68 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 RPS25P62851 125 aaKnown RBP12.02□□□□□ -0.49
PVT1-220ENST00000524165 HAMPP81172 84 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 BPIFB6Q8NFQ5 453 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 TSPAN14Q8NG11 270 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 OR4C16Q8NGL9 310 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 TMEM70Q9BUB7 260 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 CCDC90BQ9GZT6 254 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 SCPEP1Q9HB40 452 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 DAPK2Q9UIK4 370 aa12.02□□□□□ -0.49
PVT1-220ENST00000524165 CORTO00230 105 aa12.01□□□□□ -0.49
PVT1-220ENST00000524165 PLA2G1BP04054 148 aaKnown RBP12.01□□□□□ -0.49
PVT1-220ENST00000524165 RLN1P04808 185 aa12.01□□□□□ -0.49
PVT1-220ENST00000524165 ESRGQ1W209 222 aa12.01□□□□□ -0.49
PVT1-220ENST00000524165 SIGLEC15Q6ZMC9 328 aa12.01□□□□□ -0.49
PVT1-220ENST00000524165 BEST4Q8NFU0 473 aa12.01□□□□□ -0.49
PVT1-220ENST00000524165 OR4X1Q8NH49 305 aa12.01□□□□□ -0.49
PVT1-220ENST00000524165 CYGBQ8WWM9 190 aa12.01□□□□□ -0.49
PVT1-220ENST00000524165 TMEM208Q9BTX3 173 aa12.01□□□□□ -0.49
PVT1-220ENST00000524165 FNDC4Q9H6D8 234 aaPredicted RBP12.01□□□□□ -0.49
PVT1-220ENST00000524165 A0A087WTM6 91 aa12□□□□□ -0.49
PVT1-220ENST00000524165 M0QYG6 137 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms