RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 PSMB3P49720 205 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 RHOBP62745 196 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 SRSF1Q07955 248 aaKnown RBP eCLIP5.46□□□□□ -1.54
CSMD1-211ENST00000523062 EBI3Q14213 229 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 GAMTQ14353 236 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 HES1Q14469 280 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 SSX2Q16385 188 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 C5orf64Q2M2E5 130 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 PVRIGQ6DKI7 326 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 IQCF2Q8IXL9 164 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-211ENST00000523062 OR1P1Q8NH06 330 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 ABHD5Q8WTS1 349 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 SRSF12Q8WXF0 261 aaKnown RBP5.46□□□□□ -1.54
CSMD1-211ENST00000523062 C22orf15Q8WYQ4 148 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 MALSU1Q96EH3 234 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 PERPQ96FX8 193 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 SLC45A2Q9UMX9 530 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 HRNRQ86YZ3 2850 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-211ENST00000523062 FAM208BQ5VWN6 2430 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 ZFYVE26Q68DK2 2539 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 ARHGAP32A7KAX9 2087 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 IGHV4-30-2A0A087WSY4 118 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 A1L4Q6 167 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 DNASE2O00115 360 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-211ENST00000523062 NPFFO15130 113 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 CNIH1O95406 144 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 CXorf1O96002 111 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 FAM106CPP0CH98 169 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 AREGP15514 252 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 SLC25A16P16260 332 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 TMEM11P17152 192 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 BRS3P32247 399 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 SAA4P35542 130 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 PAX8Q06710 450 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 GCSAMLQ5JQS6 135 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 CYP2G1PQ6ZSU1 146 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 SLC35E3Q7Z769 313 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 DYNAPQ8N1N2 210 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 Q8N6K4 173 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 CYB561D1Q8N8Q1 229 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 THAP8Q8NA92 274 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 OR1L6Q8NGR2 347 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 NANPQ8TBE9 248 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 ACY3Q96HD9 319 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 C19orf24Q9BVV8 132 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 FNDC4Q9H6D8 234 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-211ENST00000523062 C1RLQ9NZP8 487 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 F11RQ9Y624 299 aaKnown RBP5.45□□□□□ -1.54
CSMD1-211ENST00000523062 ZNF462Q96JM2 2506 aa5.45□□□□□ -1.54
CSMD1-211ENST00000523062 FLNBO75369 2602 aaKnown RBP5.44□□□□□ -1.54
CSMD1-211ENST00000523062 USP9XQ93008 2570 aaPredicted RBP5.44□□□□□ -1.54
CSMD1-211ENST00000523062 IGKV1OR2-108A0A075B7D4 117 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 TCRBV4S1A1TA0A5B7 111 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 FAM74A7A6NL05 159 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 TMEM250H0YL14 139 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 M0R036 132 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 FCN1O00602 326 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 HMGB3O15347 200 aaKnown RBP5.44□□□□□ -1.54
CSMD1-211ENST00000523062 EIF3GO75821 320 aaKnown RBP eCLIP5.44□□□□□ -1.54
CSMD1-211ENST00000523062 SLPIP03973 132 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 CRYGCP07315 174 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 MSMBP08118 114 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 OR5G3P0C626 314 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 LINC00869P0C866 280 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 STAG3L2P0CL84 134 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 STAG3L3P0CL85 134 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 ARL14EPLP0DKL9 152 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 DEFA4P12838 97 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 RND2P52198 227 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 CEBPGP53567 150 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 SELENOTP62341 195 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 SSBP2P81877 361 aaPredicted RBP5.44□□□□□ -1.54
CSMD1-211ENST00000523062 MEF2BQ02080 365 aaPredicted RBP5.44□□□□□ -1.54
CSMD1-211ENST00000523062 FXYD3Q14802 87 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 RHEBQ15382 184 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 FAM74A3Q4VXF1 159 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 AWAT1Q58HT5 328 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 OR2T6Q8NHC8 308 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 C17orf50Q8WW18 174 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 NPIPB3Q92617 1050 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 AJUBAQ96IF1 538 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 RNF2Q99496 336 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 NIPSNAP3BQ9BS92 247 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 MRPL32Q9BYC8 188 aaKnown RBP5.44□□□□□ -1.54
CSMD1-211ENST00000523062 FUT9Q9Y231 359 aa5.44□□□□□ -1.54
CSMD1-211ENST00000523062 TMA7Q9Y2S6 64 aaKnown RBP5.44□□□□□ -1.54
CSMD1-211ENST00000523062 PUS1Q9Y606 427 aaKnown RBP eCLIP5.44□□□□□ -1.54
CSMD1-211ENST00000523062 TRAV40A0A0B4J280 105 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 IGHV1-69DA0A0B4J2H0 117 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 CENPVL3A0A0U1RRI6 287 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 NCBP2LA6PVI3 153 aaKnown RBP5.43□□□□□ -1.54
CSMD1-211ENST00000523062 H3BQ15 152 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 PAGE4O60829 102 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 IGHV1-69P01742 117 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 HLA-DRB1P01911 266 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 FBP1P09467 338 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 APELAP0DMC3 54 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 CTRB1P17538 263 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 CD24P25063 80 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms