RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 FXYD3Q14802 87 aa13.39□□□□□ -0.27
SREK1-212ENST00000522912 FAM120AOSQ5T036 256 aa13.39□□□□□ -0.27
SREK1-212ENST00000522912 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
SREK1-212ENST00000522912 SRSF8Q9BRL6 282 aaKnown RBP13.39□□□□□ -0.27
SREK1-212ENST00000522912 IGHV3-21A0A0B4J1V1 117 aa13.38□□□□□ -0.27
SREK1-212ENST00000522912 ZNF90Q03938 601 aa13.38□□□□□ -0.27
SREK1-212ENST00000522912 RHEBQ15382 184 aa13.38□□□□□ -0.27
SREK1-212ENST00000522912 FAM78BQ5VT40 261 aa13.38□□□□□ -0.27
SREK1-212ENST00000522912 ETFRF1Q6IPR1 90 aa13.38□□□□□ -0.27
SREK1-212ENST00000522912 MIR17HGQ75NE6 70 aa13.38□□□□□ -0.27
SREK1-212ENST00000522912 NIPSNAP3BQ9BS92 247 aa13.38□□□□□ -0.27
SREK1-212ENST00000522912 TCRBV4S1A1TA0A5B7 111 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 PSMB11A5LHX3 300 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 NCBP2LA6PVI3 153 aaKnown RBP13.37□□□□□ -0.27
SREK1-212ENST00000522912 NPFFO15130 113 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 TMEM11P17152 192 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 UBE2G2P60604 165 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 OR4F5Q8NH21 305 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 TVP23CQ96ET8 276 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 OR4F4Q96R69 305 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 FAM103A1Q9BTL3 118 aaKnown RBP13.37□□□□□ -0.27
SREK1-212ENST00000522912 WNT10AQ9GZT5 417 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 SMCO4Q9NRQ5 59 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 FUT9Q9Y231 359 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 PAX1P15863 534 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 CTRB1P17538 263 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 GCHFRP30047 84 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 CTRB2Q6GPI1 263 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 TMEM37Q8WXS4 190 aa13.37□□□□□ -0.27
SREK1-212ENST00000522912 TMEM250H0YL14 139 aa13.36□□□□□ -0.27
SREK1-212ENST00000522912 NDUFS6O75380 124 aaKnown RBP13.36□□□□□ -0.27
SREK1-212ENST00000522912 MT-CO2P00403 227 aa13.36□□□□□ -0.27
SREK1-212ENST00000522912 OR5G3P0C626 314 aa13.36□□□□□ -0.27
SREK1-212ENST00000522912 ABCA1O95477 2261 aa13.36□□□□□ -0.27
SREK1-212ENST00000522912 FBN2P35556 2912 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 C11orf94C9JXX5 98 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 CORTO00230 105 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 ATP5G3P48201 142 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 CX3CL1P78423 397 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 ZNF562Q6V9R5 426 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 TMEM116Q8NCL8 245 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 C19orf24Q9BVV8 132 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 CELSR2Q9HCU4 2923 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 FAM106CPP0CH98 169 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 NPPCP23582 126 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 NDPQ00604 133 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 CST9LP1Q5W188 147 aa13.35□□□□□ -0.27
SREK1-212ENST00000522912 CSMD1Q96PZ7 3565 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 IGHV3OR16-10A0A075B7F0 116 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 LOC105371267A0A1B0GV96 52 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 ZNF727A8MUV8 499 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 I3L2K1 104 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 ATF4P18848 351 aaPredicted RBP13.34□□□□□ -0.27
SREK1-212ENST00000522912 COL8A1P27658 744 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 ASPHD1Q5U4P2 390 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 Q8N9W7 124 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 NANPQ8TBE9 248 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 RPUSD4Q96CM3 377 aaKnown RBP13.34□□□□□ -0.27
SREK1-212ENST00000522912 ZNF503Q96F45 646 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 SDF2L1Q9HCN8 221 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 TNFRSF19Q9NS68 423 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 COLCA2A8K830 154 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 BRS3P32247 399 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 KIAA0141Q14154 515 aaPredicted RBP13.34□□□□□ -0.27
SREK1-212ENST00000522912 MORN5Q5VZ52 161 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 PATE2Q6UY27 113 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 TRGV9Q99603 122 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 SMIM7Q9BQ49 75 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 GSX1Q9H4S2 264 aaPredicted RBP13.34□□□□□ -0.27
SREK1-212ENST00000522912 DNAJC4Q9NNZ3 241 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 TECRQ9NZ01 308 aaKnown RBP13.34□□□□□ -0.27
SREK1-212ENST00000522912 DOK5Q9P104 306 aa13.34□□□□□ -0.27
SREK1-212ENST00000522912 YTHDF2Q9Y5A9 579 aaKnown RBP13.34□□□□□ -0.27
SREK1-212ENST00000522912 DSCR9P59020 149 aa13.33□□□□□ -0.28
SREK1-212ENST00000522912 SELENOTP62341 195 aa13.33□□□□□ -0.28
SREK1-212ENST00000522912 ZNF674Q2M3X9 581 aa13.33□□□□□ -0.28
SREK1-212ENST00000522912 ARPC1AQ92747 370 aa13.33□□□□□ -0.28
SREK1-212ENST00000522912 ISOC2Q96AB3 205 aa13.33□□□□□ -0.28
SREK1-212ENST00000522912 PARLQ9H300 379 aa13.33□□□□□ -0.28
SREK1-212ENST00000522912 TUBA4BQ9H853 241 aa13.33□□□□□ -0.28
SREK1-212ENST00000522912 IGHV1-69DA0A0B4J2H0 117 aa13.32□□□□□ -0.28
SREK1-212ENST00000522912 IGHV1-69P01742 117 aa13.32□□□□□ -0.28
SREK1-212ENST00000522912 OR51G1Q8NGK1 321 aa13.32□□□□□ -0.28
SREK1-212ENST00000522912 OR4X1Q8NH49 305 aa13.32□□□□□ -0.28
SREK1-212ENST00000522912 C22orf15Q8WYQ4 148 aa13.32□□□□□ -0.28
SREK1-212ENST00000522912 CLEC12BQ2HXU8 276 aa13.32□□□□□ -0.28
SREK1-212ENST00000522912 KLF17Q5JT82 389 aaPredicted RBP13.32□□□□□ -0.28
SREK1-212ENST00000522912 MAP1AP78559 2803 aaPredicted RBP13.31□□□□□ -0.28
SREK1-212ENST00000522912 A0A087WWC5 75 aa13.31□□□□□ -0.28
SREK1-212ENST00000522912 IGHV7-81A0A0B4J1V7 117 aa13.31□□□□□ -0.28
SREK1-212ENST00000522912 TRAV5A0A0B4J249 113 aa13.31□□□□□ -0.28
SREK1-212ENST00000522912 TRAV40A0A0B4J280 105 aa13.31□□□□□ -0.28
SREK1-212ENST00000522912 K7EIM0 57 aa13.31□□□□□ -0.28
SREK1-212ENST00000522912 PDE6DO43924 150 aa13.31□□□□□ -0.28
SREK1-212ENST00000522912 COX7A2P2O60397 106 aa13.31□□□□□ -0.28
SREK1-212ENST00000522912 CLN5O75503 358 aa13.31□□□□□ -0.28
SREK1-212ENST00000522912 MSMBP08118 114 aa13.31□□□□□ -0.28
SREK1-212ENST00000522912 C8orf88P0DMB2 117 aa13.31□□□□□ -0.28
SREK1-212ENST00000522912 EGR2P11161 476 aaPredicted RBP13.31□□□□□ -0.28
SREK1-212ENST00000522912 KRTAP10-9P60411 292 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms