RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 M0R129 80 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 TOR1AO14656 332 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 CREBL2O60519 120 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-208ENST00000521037 SLC16A7O60669 478 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 OR2J3O76001 311 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 AMBPP02760 352 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 UCHL1P09936 223 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 GATA1P15976 413 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF3P17036 446 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 RAB3AP20336 220 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 RAB3BP20337 219 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 NFYAP23511 347 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-208ENST00000521037 RBM34P42696 430 aaKnown RBP2.68□□□□□ -1.98
VPS13B-208ENST00000521037 OMPP47874 163 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 PRKXP51817 358 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 FLI1Q01543 452 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-208ENST00000521037 MEF2CQ06413 473 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-208ENST00000521037 PRDX4Q13162 271 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 HES1Q14469 280 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 DEFB114Q30KQ6 69 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 LGALSLQ3ZCW2 172 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-208ENST00000521037 FFAR4Q5NUL3 377 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 C1orf134Q5TEV5 83 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 OR2G6Q5TZ20 316 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 RPL22L1Q6P5R6 122 aaKnown RBP2.68□□□□□ -1.98
VPS13B-208ENST00000521037 HEPN1Q6WQI6 88 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 SLC25A48Q6ZT89 311 aaKnown RBP2.68□□□□□ -1.98
VPS13B-208ENST00000521037 LHFPL3Q86UP9 236 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 OR2T35Q8NGX2 323 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 MARCH1Q8TCQ1 289 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 MRGPRDQ8TDS7 321 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 TMEM190Q8WZ59 177 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 S100A16Q96FQ6 103 aaKnown RBP2.68□□□□□ -1.98
VPS13B-208ENST00000521037 C9orf85Q96MD7 179 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 PARLQ9H300 379 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 C11orf68Q9H3H3 251 aaKnown RBP2.68□□□□□ -1.98
VPS13B-208ENST00000521037 MTCH1Q9NZJ7 389 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 COPS3Q9UNS2 423 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 LINC00312Q9Y6C7 94 aa2.68□□□□□ -1.98
VPS13B-208ENST00000521037 TRAV6A0A075B6T7 132 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 LOC102724200A0A096LPH7 203 aaPredicted RBP2.67□□□□□ -1.98
VPS13B-208ENST00000521037 IGHV3-72A0A0B4J1Y9 119 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 A0A0D9SG52 128 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 ANKRD20A5PA0PJZ0 165 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 A6NIZ1 184 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 PMS2P5A8MQ11 134 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 MPTX1A8MV57 137 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 HSBP1L1C9JCN9 74 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 MCRIP1C9JLW8 97 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 AIPO00170 330 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 SULT1C2O00338 296 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF593O00488 134 aaPredicted RBP2.67□□□□□ -1.98
VPS13B-208ENST00000521037 IGHV3-11P01762 117 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 EIF4EP06730 217 aaKnown RBP2.67□□□□□ -1.98
VPS13B-208ENST00000521037 CD14P08571 375 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 UBBP0CG47 229 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 UBCP0CG48 685 aaKnown RBP2.67□□□□□ -1.98
VPS13B-208ENST00000521037 STAG3L2P0CL84 134 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 IFI30P13284 250 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 MGMTP16455 207 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 GNB3P16520 340 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 SERPINA2P20848 420 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 S100A11P31949 105 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 BTCP35070 178 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 GPR4P46093 362 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 BLVRAP53004 296 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 RAP1BP61224 184 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 TSPAN5P62079 268 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 RAP1AP62834 184 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 HAMPP81172 84 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 ARL16Q0P5N6 197 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 GNMTQ14749 295 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 Q3ZCU0 254 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 ACSM3Q53FZ2 586 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 CLVS2Q5SYC1 327 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 ZNF660Q6AZW8 331 aaPredicted RBP2.67□□□□□ -1.98
VPS13B-208ENST00000521037 LCN12Q6JVE5 192 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 LPCAT3Q6P1A2 487 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 DRAM2Q6UX65 266 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 GTSCR1Q86UQ5 136 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 NRMQ8IXM6 262 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 FTMTQ8N4E7 242 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 OR10H4Q8NGA5 316 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 OR11H7Q8NGC8 314 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 OR8D4Q8NGM9 314 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 OR8S1Q8NH09 359 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 OR51A7Q8NH64 312 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 RFESDQ8TAC1 157 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 C11orf45Q8TAV5 145 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 UBALD1Q8TB05 177 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 FANK1Q8TC84 345 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 TMEM239Q8WW34 195 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 TOMM40LQ969M1 308 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 SMIM19Q96E16 107 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 PHYHIPLQ96FC7 376 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 SPACA5Q96QH8 159 aa2.67□□□□□ -1.98
VPS13B-208ENST00000521037 GPX7Q96SL4 187 aaPredicted RBP2.67□□□□□ -1.98
VPS13B-208ENST00000521037 AMELYQ99218 206 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms