RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 FCER2P06734 321 aa8.78□□□□□ -1
TRAPPC9-204ENST00000518723 ZNF705DP0CH99 300 aaPredicted RBP8.78□□□□□ -1
TRAPPC9-204ENST00000518723 ZNF705BP0CI00 300 aaPredicted RBP8.78□□□□□ -1
TRAPPC9-204ENST00000518723 HSPE1P61604 102 aaKnown RBP8.78□□□□□ -1
TRAPPC9-204ENST00000518723 PSMG4Q5JS54 123 aa8.78□□□□□ -1
TRAPPC9-204ENST00000518723 OR4A16Q8NH70 328 aa8.78□□□□□ -1
TRAPPC9-204ENST00000518723 NARS2Q96I59 477 aaKnown RBP8.78□□□□□ -1
TRAPPC9-204ENST00000518723 SEC22AQ96IW7 307 aa8.78□□□□□ -1
TRAPPC9-204ENST00000518723 EHFQ9NZC4 300 aa8.78□□□□□ -1
TRAPPC9-204ENST00000518723 XCL2Q9UBD3 114 aa8.78□□□□□ -1
TRAPPC9-204ENST00000518723 RRP15Q9Y3B9 282 aaKnown RBP8.78□□□□□ -1
TRAPPC9-204ENST00000518723 HELTA6NFD8 242 aa8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 INS-IGF2F8WCM5 200 aa8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 H3BMM0 161 aa8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 GPR31O00270 319 aa8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 EIF2B2P49770 351 aaKnown RBP8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 DHRS2Q13268 280 aa8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 ZNF2Q9BSG1 426 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 RNF167Q9H6Y7 350 aa8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 SEPSECSQ9HD40 501 aaKnown RBP8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 TXNL4BQ9NX01 149 aaKnown RBP8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 DKK2Q9UBU2 259 aa8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 U3KQE9 123 aa8.77□□□□□ -1.01
TRAPPC9-204ENST00000518723 CORTO00230 105 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 EBAG9O00559 213 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 CLN5O75503 358 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 RFX2P48378 723 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 PPP5CP53041 499 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 AQP4P55087 323 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 OXA1LQ15070 435 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 H2BFWTQ7Z2G1 175 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 OR5H6Q8NGV6 325 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 NIPSNAP3BQ9BS92 247 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 FXYD6Q9H0Q3 95 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 SCRT2Q9NQ03 307 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 ANAPC10Q9UM13 185 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 NACAE9PAV3 2078 aa8.76□□□□□ -1.01
TRAPPC9-204ENST00000518723 FAM90A26D6RGX4 464 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 SCGB2A1O75556 95 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 IGKV1-39P01597 117 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 IGKV1-17P01599 117 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 IGKV1D-39P04432 117 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 SNCAP37840 140 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 AP2S1P53680 142 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 EMP1P54849 157 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 SNRPD3P62318 126 aaKnown RBP8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 FAM222AQ5U5X8 452 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 OR4X1Q8NH49 305 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 GLMPQ8WWB7 406 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 TMEM230Q96A57 120 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 IFT46Q9NQC8 304 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 DIABLOQ9NR28 239 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 MRPL36Q9P0J6 103 aaKnown RBP8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 RFNGQ9Y644 331 aa8.75□□□□□ -1.01
TRAPPC9-204ENST00000518723 MEIS3P1A6NDR6 274 aa8.74□□□□□ -1.01
TRAPPC9-204ENST00000518723 HLA-DRB4P13762 266 aa8.74□□□□□ -1.01
TRAPPC9-204ENST00000518723 S100GP29377 79 aa8.74□□□□□ -1.01
TRAPPC9-204ENST00000518723 TAS2R46P59540 309 aa8.74□□□□□ -1.01
TRAPPC9-204ENST00000518723 C16orf54Q6UWD8 224 aa8.74□□□□□ -1.01
TRAPPC9-204ENST00000518723 C6orf223Q8N319 242 aa8.74□□□□□ -1.01
TRAPPC9-204ENST00000518723 MRGPRFQ96AM1 343 aa8.74□□□□□ -1.01
TRAPPC9-204ENST00000518723 FNDC4Q9H6D8 234 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC9-204ENST00000518723 BLOC1S6Q9UL45 172 aa8.74□□□□□ -1.01
TRAPPC9-204ENST00000518723 HLA-DRB4X5D2U9 266 aa8.74□□□□□ -1.01
TRAPPC9-204ENST00000518723 PMP2P02689 132 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 RNASE2P10153 161 aaKnown RBP8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 NAT1P18440 290 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 SDC2P34741 201 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 RPL5P46777 297 aaKnown RBP8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 SUB1P53999 127 aaKnown RBP eCLIP8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 PHLDA2Q53GA4 152 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 SPINK9Q5DT21 86 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 TMEM88Q6PEY1 159 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 TBC1D26Q86UD7 250 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 C15orf53Q8NAA6 179 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 OR5H2Q8NGV7 314 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 OR6F1Q8NGZ6 308 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 YTHDF1Q9BYJ9 559 aaKnown RBP8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 NRN1Q9NPD7 142 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 TMED3Q9Y3Q3 217 aa8.73□□□□□ -1.01
TRAPPC9-204ENST00000518723 TRAV30A0A087WSZ9 112 aa8.72□□□□□ -1.01
TRAPPC9-204ENST00000518723 NBDYA0A0U1RRE5 68 aa8.72□□□□□ -1.01
TRAPPC9-204ENST00000518723 HNRNPCP07910 306 aaKnown RBP eCLIP8.72□□□□□ -1.01
TRAPPC9-204ENST00000518723 HTN3P15516 51 aa8.72□□□□□ -1.01
TRAPPC9-204ENST00000518723 NKX2-1P43699 371 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC9-204ENST00000518723 HOXA1P49639 335 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC9-204ENST00000518723 TIGITQ495A1 244 aa8.72□□□□□ -1.01
TRAPPC9-204ENST00000518723 LPCAT3Q6P1A2 487 aa8.72□□□□□ -1.01
TRAPPC9-204ENST00000518723 SLC35G3Q8N808 338 aa8.72□□□□□ -1.01
TRAPPC9-204ENST00000518723 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
TRAPPC9-204ENST00000518723 SSR3Q9UNL2 185 aa8.72□□□□□ -1.01
TRAPPC9-204ENST00000518723 CLEC2LP0C7M8 214 aa8.71□□□□□ -1.02
TRAPPC9-204ENST00000518723 P0C879 139 aa8.71□□□□□ -1.02
TRAPPC9-204ENST00000518723 OPRK1P41145 380 aa8.71□□□□□ -1.02
TRAPPC9-204ENST00000518723 MXD1Q05195 221 aa8.71□□□□□ -1.02
TRAPPC9-204ENST00000518723 MLANAQ16655 118 aa8.71□□□□□ -1.02
TRAPPC9-204ENST00000518723 IZUMO4Q1ZYL8 232 aa8.71□□□□□ -1.02
TRAPPC9-204ENST00000518723 BSXQ3C1V8 233 aa8.71□□□□□ -1.02
TRAPPC9-204ENST00000518723 IDNKQ5T6J7 187 aa8.71□□□□□ -1.02
TRAPPC9-204ENST00000518723 ZNRF2Q8NHG8 242 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms