RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 GTSF1LQ9H1H1 148 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 ARID2Q68CP9 1835 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 IGHV3OR16-8A0A075B7F1 116 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 FOXL1Q12952 345 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 FAM71F2Q6NXP2 309 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 TMEM105Q8N8V8 129 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 TSKUQ8WUA8 353 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 CHODLQ9H9P2 273 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 NEUROG3Q9Y4Z2 214 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 PPBPP02775 128 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 ERVK11-1P61568 191 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 REPIN1Q9BWE0 567 aaKnown RBP11.12□□□□□ -0.63
TCOF1-214ENST00000515035 WDR83OSQ9Y284 106 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 MYO16Q9Y6X6 1858 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 TRAV2A0A0B4J234 112 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 PRR32B1ATL7 298 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 CLEC2AQ6UVW9 174 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 PAQR4Q8N4S7 273 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-214ENST00000515035 GFI1Q99684 422 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 SLC25A2Q9BXI2 301 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 KIF26BQ2KJY2 2108 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 SRSF6Q13247 344 aaKnown RBP11.12□□□□□ -0.63
TCOF1-214ENST00000515035 EFNB3Q15768 340 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 LY6EQ16553 131 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 MPV17L2Q567V2 206 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 VWCEQ96DN2 955 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 C1QTNF5Q9BXJ0 243 aa11.12□□□□□ -0.63
TCOF1-214ENST00000515035 LOC105371242A0A075B767 164 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 IGKV1-9A0A0C4DH69 117 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 KBTBD11-OT1A0A1B0GTJ5 212 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 C9orf172C9J069 976 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 SRSF1Q07955 248 aaKnown RBP eCLIP11.11□□□□□ -0.63
TCOF1-214ENST00000515035 ZNF664Q8N3J9 261 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 FAM89BQ8N5H3 189 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 RBMY1BA6NDE4 496 aaKnown RBP11.11□□□□□ -0.63
TCOF1-214ENST00000515035 RBMY1EA6NEQ0 496 aaKnown RBP11.11□□□□□ -0.63
TCOF1-214ENST00000515035 RBMY1DP0C7P1 496 aaKnown RBP11.11□□□□□ -0.63
TCOF1-214ENST00000515035 RBMY1A1P0DJD3 496 aaKnown RBP11.11□□□□□ -0.63
TCOF1-214ENST00000515035 RBMY1CP0DJD4 496 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 CSRP1P21291 193 aaKnown RBP11.11□□□□□ -0.63
TCOF1-214ENST00000515035 IGHV1-69-2A0A0G2JMI3 117 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 A0A1B0GW64 132 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 GTF3AQ92664 365 aaKnown RBP11.11□□□□□ -0.63
TCOF1-214ENST00000515035 MRPL20Q9BYC9 149 aaKnown RBP11.11□□□□□ -0.63
TCOF1-214ENST00000515035 IGKV1D-8A0A087WSZ0 117 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 PLNP26678 52 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 ATP5L2Q7Z4Y8 100 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 PPP1R32Q7Z5V6 425 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 FAM216BQ8N7L0 139 aa11.11□□□□□ -0.63
TCOF1-214ENST00000515035 SCN8AQ9UQD0 1980 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 J3QRE1 110 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 KIR3DL3Q8N743 410 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 TRAV1-1A0A0B4J248 108 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 TM4SF5O14894 197 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 TRGV3P03979 118 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 LCN12Q6JVE5 192 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 BCL6BQ8N143 479 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-214ENST00000515035 ASCL2Q99929 193 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 SDK2Q58EX2 2172 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 UMODP07911 640 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 FAM201AQ5SY85 155 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 Q6ZT83 130 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 LINC01551Q86U37 167 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 RNF182Q8N6D2 247 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 ZNF703Q9H7S9 590 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-214ENST00000515035 RAMP3O60896 148 aa11.1□□□□□ -0.63
TCOF1-214ENST00000515035 SAA1P0DJI8 122 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-214ENST00000515035 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
TCOF1-214ENST00000515035 C15orf61A6NNL5 157 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 GLRXP35754 106 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 CD69Q07108 199 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 CRIPAKQ8N1N5 446 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 PSG8Q9UQ74 426 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 SLC25A15Q9Y619 301 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 BRCA1P38398 1863 aaKnown RBP11.09□□□□□ -0.63
TCOF1-214ENST00000515035 UPK2O00526 184 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 C3orf79P0CE67 100 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 ZNF837Q96EG3 531 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-214ENST00000515035 CHTOPQ9Y3Y2 248 aaKnown RBP11.09□□□□□ -0.63
TCOF1-214ENST00000515035 PRTN3P24158 256 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 ORMDL2Q53FV1 153 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 ATP1A1-AS1Q5TC04 95 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 DPM3Q9P2X0 92 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 TRPM7Q96QT4 1865 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 A0A087X0K7 114 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 PLAURQ03405 335 aa11.09□□□□□ -0.63
TCOF1-214ENST00000515035 EREGO14944 169 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 RFPL3SP0C7P2 107 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 ESDP10768 282 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 TDGF1P3P51864 188 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 GUSBP1Q15486 140 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 ACTL10Q5JWF8 245 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 ERG28Q9UKR5 140 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 RNF115Q9Y4L5 304 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 A0A0A6YYD4 124 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 IGKV3D-20A0A0C4DH25 116 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 hDV102S1A0JD36 115 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 PSG1P11464 419 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 CD33P20138 364 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms