RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 OR52R1Q8NGF1 315 aa2.37□□□□□ -2.03
CALCOCO2-222ENST00000514006 PFN4Q8NHR9 129 aa2.37□□□□□ -2.03
CALCOCO2-222ENST00000514006 CXCL16Q9H2A7 254 aa2.37□□□□□ -2.03
CALCOCO2-222ENST00000514006 RNF122Q9H9V4 155 aa2.37□□□□□ -2.03
CALCOCO2-222ENST00000514006 BIN3Q9NQY0 253 aa2.37□□□□□ -2.03
CALCOCO2-222ENST00000514006 PBRM1Q86U86 1689 aa2.37□□□□□ -2.03
CALCOCO2-222ENST00000514006 FMN1Q68DA7 1419 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 IGLV3-9A0A075B6K5 115 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 OR51F1A6NGY5 319 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 C1orf196B1AJZ1 125 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 H3BRN7 92 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 AIPO00170 330 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 CYB5BO43169 146 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 DR1Q01658 176 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 RELAQ04206 551 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 LINC01554Q52M75 96 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 ZHX1-C8orf76Q96EF9 292 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 TIMM21Q9BVV7 248 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 IMUPQ9GZP8 106 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 PCBD2Q9H0N5 130 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 OSTCQ9NRP0 149 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 LYRM2Q9NU23 88 aaPredicted RBP2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 MED29Q9NX70 200 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 CKLFQ9UBR5 152 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 SS18L2Q9UHA2 77 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 ICE1Q9Y2F5 2266 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 ZFHX2Q9C0A1 2572 aaPredicted RBP2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 UBR2Q8IWV8 1755 aa2.36□□□□□ -2.03
CALCOCO2-222ENST00000514006 CUL9Q8IWT3 2517 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 OBSL1O75147 1896 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 SCAF11Q99590 1463 aaKnown RBP2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 MEIS3P1A6NDR6 274 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 H7C1C5 153 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 PGLYRP1O75594 196 aaPredicted RBP2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 METTL15P1P0C7V9 234 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 IFI30P13284 250 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 SRIP30626 198 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 LCN6P62502 163 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 SLC38A11Q08AI6 406 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 DPPA3Q6W0C5 159 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 ZNF439Q8NDP4 499 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 TXNDC17Q9BRA2 123 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 TTTY12Q9BZ98 90 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 SH3BGRL3Q9H299 93 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 SSR3Q9UNL2 185 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 AMMECR1Q9Y4X0 333 aaPredicted RBP2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 SYNMO15061 1565 aa2.35□□□□□ -2.03
CALCOCO2-222ENST00000514006 DENND4CQ5VZ89 1909 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 RTEL1-TNFRSF6BF6WH68 1400 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 MDC1Q14676 2089 aaKnown RBP2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 COL5A1P20908 1838 aaPredicted RBP2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 A0A087X0T9 212 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 A0A0D9SG52 128 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 PCNX2A6NKB5 2137 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 C19orf84I3L1E1 186 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 IGKV1-16P04430 117 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 RPSAP08865 295 aaKnown RBP2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 HTR1AP08908 422 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 P0DMU3 169 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 FAM231AP0DMU4 169 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 FAM231CP0DMU5 169 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 SERPINB1P30740 379 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 AQP4P55087 323 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 TSNQ15631 228 aaKnown RBP2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 KHDC3LQ587J8 217 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 GRINAQ7Z429 371 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 STX19Q8N4C7 294 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 SIGLECL1Q8N7X8 197 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 WFDC11Q8NEX6 87 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 OR8D4Q8NGM9 314 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 PBDC1Q9BVG4 233 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 CENPHQ9H3R5 247 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 ACER3Q9NUN7 267 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 BAIAP2Q9UQB8 552 aa2.34□□□□□ -2.03
CALCOCO2-222ENST00000514006 DOCK4Q8N1I0 1966 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 ZNF860A6NHJ4 632 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 ZNF705FA8MVS1 300 aaPredicted RBP2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 PPP5D1E7EU14 171 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 BANF1O75531 89 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 TCL1BO95988 128 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 SNCBQ16143 134 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 TPRXLQ17RH7 258 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 AAED1Q7RTV5 226 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 OR5A1Q8NGJ0 315 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 GPER1Q99527 375 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 TMEM70Q9BUB7 260 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 CCDC88CQ9P219 2028 aa2.33□□□□□ -2.04
CALCOCO2-222ENST00000514006 ORC5O43913 435 aa2.32□□□□□ -2.04
CALCOCO2-222ENST00000514006 MFSD11O43934 449 aa2.32□□□□□ -2.04
CALCOCO2-222ENST00000514006 NAPSAO96009 420 aa2.32□□□□□ -2.04
CALCOCO2-222ENST00000514006 IDO1P14902 403 aa2.32□□□□□ -2.04
CALCOCO2-222ENST00000514006 EIF5AP63241 154 aaKnown RBP2.32□□□□□ -2.04
CALCOCO2-222ENST00000514006 RRN3P1Q2M238 152 aa2.32□□□□□ -2.04
CALCOCO2-222ENST00000514006 SCGB2B2Q4G0G5 96 aa2.32□□□□□ -2.04
CALCOCO2-222ENST00000514006 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
CALCOCO2-222ENST00000514006 LCN15Q6UWW0 184 aa2.32□□□□□ -2.04
CALCOCO2-222ENST00000514006 SMIM15Q7Z3B0 74 aa2.32□□□□□ -2.04
CALCOCO2-222ENST00000514006 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.32□□□□□ -2.04
CALCOCO2-222ENST00000514006 OR8B3Q8NGG8 313 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms