RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 OR10J1P30954 320 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 SAA4P35542 130 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 MFAP2P55001 183 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 FGF8P55075 233 aaPredicted RBP6.65□□□□□ -1.34
RNF4-220ENST00000513578 HNF4GQ14541 408 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 PLGLAQ15195 96 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 MLANAQ16655 118 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 FAM74A3Q4VXF1 159 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 CYP2G1PQ6ZSU1 146 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 RXFP4Q8TDU9 374 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 GATAD1Q8WUU5 269 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 C22orf15Q8WYQ4 148 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 TRGV9Q99603 122 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 MRPL32Q9BYC8 188 aaKnown RBP6.65□□□□□ -1.34
RNF4-220ENST00000513578 TUBA4BQ9H853 241 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 IGKV1D-37A0A075B6S9 117 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 A0A1W2PRD5 423 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 A0A1W2PRF3 423 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 A0A1W2PRM7 423 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 ZFP92A6NM28 416 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 I3L2K1 104 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 CNIH1O95406 144 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 OR5G3P0C626 314 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 TMEM11P17152 192 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 PAX6P26367 422 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 NPBWR1P48145 328 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 PLP1P60201 277 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 MEF2BQ02080 365 aaPredicted RBP6.64□□□□□ -1.35
RNF4-220ENST00000513578 BTN1A1Q13410 526 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 HES1Q14469 280 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 FXYD3Q14802 87 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 RHEBQ15382 184 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 CLEC12BQ2HXU8 276 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 GCSAMLQ5JQS6 135 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 FAM90A2PQ658T7 463 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 TTC9CQ8N5M4 171 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 Q8N9W7 124 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 OR1L4Q8NGR5 311 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 OR2T6Q8NHC8 308 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 C17orf50Q8WW18 174 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 SSMEM1Q8WWF3 244 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 MBD6Q96DN6 1003 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 PERPQ96FX8 193 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 TMEM68Q96MH6 324 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 ZNF48Q96MX3 618 aaPredicted RBP6.64□□□□□ -1.35
RNF4-220ENST00000513578 PFDN5Q99471 154 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 FUT9Q9Y231 359 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 NF1P21359 2839 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 SPG11Q96JI7 2443 aa6.64□□□□□ -1.35
RNF4-220ENST00000513578 B4DEV8 164 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 J3QLI3 93 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 CLN5O75503 358 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 RND2P52198 227 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 TAS2R45P59539 299 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 BPIFB3P59826 476 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 CD81P60033 236 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 GNB1P62873 340 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 CX3CL1P78423 397 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 LOXL1Q08397 574 aaPredicted RBP6.63□□□□□ -1.35
RNF4-220ENST00000513578 PNRC1Q12796 327 aaPredicted RBP6.63□□□□□ -1.35
RNF4-220ENST00000513578 SPNS3Q6ZMD2 512 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 PQLC2Q6ZP29 291 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 MED13LQ71F56 2210 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 CYB561D1Q8N8Q1 229 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 OR4X1Q8NH49 305 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 ABHD5Q8WTS1 349 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 NPIPB3Q92617 1050 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 ARPC1AQ92747 370 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 TVP23CQ96ET8 276 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 ACY3Q96HD9 319 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 SLC25A33Q9BSK2 321 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 WNT10AQ9GZT5 417 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 TMEM167BQ9NRX6 74 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 TECRQ9NZ01 308 aaKnown RBP6.63□□□□□ -1.35
RNF4-220ENST00000513578 DMRT1Q9Y5R6 373 aa6.63□□□□□ -1.35
RNF4-220ENST00000513578 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.62□□□□□ -1.354e-7■■■■■ 33.2
RNF4-220ENST00000513578 IGLV11-55A0A075B6I3 123 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 TRAV30A0A087WSZ9 112 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 A0A087WWC5 75 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 ELOA3CA0A087WX78 387 aaPredicted RBP6.62□□□□□ -1.35
RNF4-220ENST00000513578 C7orf77A4D0Y5 90 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 F6UZH7 168 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 H3BQ15 152 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 PDE6DO43924 150 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 REG1AP05451 166 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 ARL14EPLP0DKL9 152 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 GCHFRP30047 84 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 FBLN7Q53RD9 439 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 AWAT1Q58HT5 328 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 FAM120AOSQ5T036 256 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 ASPHD1Q5U4P2 390 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 FAM78BQ5VT40 261 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 PRSS57Q6UWY2 283 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 LINC01356Q8N9X3 169 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 TMEM37Q8WXS4 190 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 MISP3Q96FF7 219 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 SEPSECSQ9HD40 501 aaKnown RBP6.62□□□□□ -1.35
RNF4-220ENST00000513578 DNAJC4Q9NNZ3 241 aa6.62□□□□□ -1.35
RNF4-220ENST00000513578 SMCO4Q9NRQ5 59 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms