RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 FOXF1Q12946 379 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 HTR4Q13639 388 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 AADACL3Q5VUY0 350 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 FKBP1CQ5VVH2 108 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 GLT8D1Q68CQ7 371 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 LCA10Q71F78 164 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 KTN1-AS1Q86SY8 53 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 WFDC5Q8TCV5 224 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 SKA2Q8WVK7 121 aaPredicted RBP0.97□□□□□ -2.25
RNF4-219ENST00000513450 HIST1H2BAQ96A08 127 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 SLAMF6Q96DU3 332 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 ADAT3Q96EY9 351 aaPredicted RBP0.97□□□□□ -2.25
RNF4-219ENST00000513450 HSPB9Q9BQS6 159 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 DOHHQ9BU89 302 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 DERL1Q9BUN8 251 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 CCDC32Q9BV29 185 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 COMMD5Q9GZQ3 224 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 AICDAQ9GZX7 198 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 PBOV1Q9GZY1 135 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 TMEM133Q9H2Q1 129 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 POPDC3Q9HBV1 291 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 OTORQ9NRC9 128 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 MRPL16Q9NX20 251 aaKnown RBP0.97□□□□□ -2.25
RNF4-219ENST00000513450 TVP23BQ9NYZ1 205 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 IL36BQ9NZH7 164 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 FUT9Q9Y231 359 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 RNF11Q9Y3C5 154 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 RBM7Q9Y580 266 aaKnown RBP0.97□□□□□ -2.25
RNF4-219ENST00000513450 SCN9AQ15858 1988 aa0.97□□□□□ -2.25
RNF4-219ENST00000513450 TRPM3Q9HCF6 1732 aaPredicted RBP0.97□□□□□ -2.25
RNF4-219ENST00000513450 SCN8AQ9UQD0 1980 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 SHANK3Q9BYB0 1731 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 LOC107984640A0A0U1RRK4 108 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 A0A1B0GX51 115 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 DUXBA0A1W2PPF3 345 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 C1orf196B1AJZ1 125 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 E7EQ34 232 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 LY6LH3BQJ8 138 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 J3KT08 172 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 SLC17A3O00476 420 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 TAX1BP3O14907 124 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 LY6HO94772 140 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 TNFSF15O95150 251 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 IFNA7P01567 189 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 PRM2P04554 102 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 HIST1H2BOP23527 126 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 NPPCP23582 126 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 KDELR1P24390 212 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 HLA-DMBP28068 263 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 S100A11P31949 105 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 HIST1H2BBP33778 126 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 SRP9P49458 86 aaKnown RBP0.96□□□□□ -2.26
RNF4-219ENST00000513450 RBM11P57052 281 aaKnown RBP0.96□□□□□ -2.26
RNF4-219ENST00000513450 HIST1H2BDP58876 126 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 TAS2R45P59539 299 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 HIST1H2BCP62807 126 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 HIST1H1AQ02539 215 aaPredicted RBP0.96□□□□□ -2.26
RNF4-219ENST00000513450 PLCXD2Q0VAA5 305 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 MSMO1Q15800 293 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 HIST2H2BEQ16778 126 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 RRN3P1Q2M238 152 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 LINC01554Q52M75 96 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.96□□□□□ -2.26
RNF4-219ENST00000513450 NOXRED1Q6NXP6 359 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 RASL11AQ6T310 242 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 ZNF322Q6U7Q0 402 aaPredicted RBP0.96□□□□□ -2.26
RNF4-219ENST00000513450 AMTNQ6UX39 209 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 SDIM1Q6ZPB5 146 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 ANGPTL5Q86XS5 388 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 C3orf56Q8N813 242 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 CNEP1R1Q8N9A8 125 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 TMEM229BQ8NBD8 167 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 NUP35Q8NFH5 326 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 OR51T1Q8NGJ9 327 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 OR4C16Q8NGL9 310 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 OR9Q1Q8NGQ5 310 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 OR13C4Q8NGS5 318 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 MBD3L1Q8WWY6 194 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 ACOT12Q8WYK0 555 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 LZICQ8WZA0 190 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 HIST1H2BHQ93079 126 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 MALSU1Q96EH3 234 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 BORCS8Q96FH0 119 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 TEX37Q96LM6 180 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 HIST1H2BNQ99877 126 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 HIST1H2BMQ99879 126 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 TUBA4BQ9H853 241 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 TPT1P8Q9HAU6 139 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 TAF9BQ9HBM6 251 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 HSPB8Q9UJY1 196 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 MED31Q9Y3C7 131 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 NUP210LQ5VU65 1888 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 NUP210Q8TEM1 1887 aaPredicted RBP0.96□□□□□ -2.26
RNF4-219ENST00000513450 NYNRINQ9P2P1 1898 aaKnown RBP0.96□□□□□ -2.26
RNF4-219ENST00000513450 BCL9O00512 1426 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 UHRF1BP1Q6BDS2 1440 aa0.96□□□□□ -2.26
RNF4-219ENST00000513450 PTPRSQ13332 1948 aa0.95□□□□□ -2.26
RNF4-219ENST00000513450 GREB1Q4ZG55 1949 aa0.95□□□□□ -2.26
RNF4-219ENST00000513450 CCDC171Q6TFL3 1326 aa0.95□□□□□ -2.26
RNF4-219ENST00000513450 MEIKINA0A087WXM9 373 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms