RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ETFRF1Q6IPR1 90 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 ACOT7LQ6ZUV0 252 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 TMEM217Q8N7C4 229 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 OR4X2Q8NGF9 303 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 SCARB1Q8WTV0 552 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 BSCL2Q96G97 398 aaPredicted RBP9.74□□□□□ -0.85
PDPN-210ENST00000513143 GGACTQ9BVM4 153 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 MFFQ9GZY8 342 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 A0A0G2JLM5 398 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 MFSD2BA6NFX1 497 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 FNDC10F2Z333 226 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 DLK1P80370 383 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 ATP5G2Q06055 141 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 SLC38A11Q08AI6 406 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 ZNF345Q14585 488 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 AWAT1Q58HT5 328 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 SLC16A13Q7RTY0 426 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 ZNF491Q8N8L2 437 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 OR1S2Q8NGQ3 325 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 CXorf58Q96LI9 332 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 C19orf24Q9BVV8 132 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 ZC4H2Q9NQZ6 224 aa9.73□□□□□ -0.85
PDPN-210ENST00000513143 IGHV3-21A0A0B4J1V1 117 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 IGHV3-48P01763 117 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 CD28P10747 220 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 CXCL2P19875 107 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 FCGR2BP31994 310 aaPredicted RBP9.72□□□□□ -0.85
PDPN-210ENST00000513143 EIF2B2P49770 351 aaKnown RBP9.72□□□□□ -0.85
PDPN-210ENST00000513143 KRTAP10-3P60369 221 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 OR2F1Q13607 317 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 GAMTQ14353 236 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 ATP6V1FQ16864 119 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 TMEM116Q8NCL8 245 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 OR5C1Q8NGR4 320 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 ZNF502Q8TBZ5 544 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 WFDC12Q8WWY7 111 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 TMEM158Q8WZ71 300 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 EEF1AKMT3Q96AZ1 226 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 UBE2E2Q96LR5 201 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 C21orf62Q9NYP8 219 aa9.72□□□□□ -0.85
PDPN-210ENST00000513143 MRPL36Q9P0J6 103 aaKnown RBP9.72□□□□□ -0.85
PDPN-210ENST00000513143 FBN1P35555 2871 aaKnown RBP9.72□□□□□ -0.85
PDPN-210ENST00000513143 TRBV7-1A0A0A6YYK4 115 aa9.71□□□□□ -0.86
PDPN-210ENST00000513143 CDX1P47902 265 aaPredicted RBP9.71□□□□□ -0.86
PDPN-210ENST00000513143 AP2S1P53680 142 aaPredicted RBP9.71□□□□□ -0.86
PDPN-210ENST00000513143 MFAP4P55083 255 aa9.71□□□□□ -0.86
PDPN-210ENST00000513143 VWC2Q2TAL6 325 aa9.71□□□□□ -0.86
PDPN-210ENST00000513143 ZNF343Q6P1L6 599 aa9.71□□□□□ -0.86
PDPN-210ENST00000513143 LILRB2Q8N423 598 aa9.71□□□□□ -0.86
PDPN-210ENST00000513143 KCNRGQ8N5I3 272 aa9.71□□□□□ -0.86
PDPN-210ENST00000513143 OR4X1Q8NH49 305 aa9.71□□□□□ -0.86
PDPN-210ENST00000513143 SLC35E1Q96K37 410 aa9.71□□□□□ -0.86
PDPN-210ENST00000513143 ATP6V0BQ99437 205 aa9.71□□□□□ -0.86
PDPN-210ENST00000513143 TXN2Q99757 166 aa9.71□□□□□ -0.86
PDPN-210ENST00000513143 S4R3C0 116 aa9.71□□□□□ -0.86
PDPN-210ENST00000513143 A0A0D9SG52 128 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 TCRBV4S1A1TA0A5B7 111 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 F8W735 103 aaPredicted RBP9.7□□□□□ -0.86
PDPN-210ENST00000513143 IGHV3-23P01764 117 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 RND2P52198 227 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 CLINT1Q14677 625 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 LGALSLQ3ZCW2 172 aaPredicted RBP9.7□□□□□ -0.86
PDPN-210ENST00000513143 ACSM6Q6P461 480 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 C11orf44Q8N8P7 122 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 NPIPB3Q92617 1050 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 PPP1R14BQ96C90 147 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 CCDC140Q96MF4 163 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 CITED2Q99967 270 aaPredicted RBP9.7□□□□□ -0.86
PDPN-210ENST00000513143 TMEM147Q9BVK8 224 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 SMIM3Q9BZL3 60 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 GNB4Q9HAV0 340 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 NPVFQ9HCQ7 196 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 UQCC1Q9NVA1 299 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 FBXL17Q9UF56 701 aa9.7□□□□□ -0.86
PDPN-210ENST00000513143 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.69□□□□□ -0.86
PDPN-210ENST00000513143 CLN5O75503 358 aa9.69□□□□□ -0.86
PDPN-210ENST00000513143 DFFBO76075 338 aa9.69□□□□□ -0.86
PDPN-210ENST00000513143 IGHV3-11P01762 117 aa9.69□□□□□ -0.86
PDPN-210ENST00000513143 NPBWR1P48145 328 aa9.69□□□□□ -0.86
PDPN-210ENST00000513143 SMCPP49901 116 aaPredicted RBP9.69□□□□□ -0.86
PDPN-210ENST00000513143 FAM209BQ5JX69 171 aa9.69□□□□□ -0.86
PDPN-210ENST00000513143 LAMTOR1Q6IAA8 161 aa9.69□□□□□ -0.86
PDPN-210ENST00000513143 TMEM144Q7Z5S9 345 aa9.69□□□□□ -0.86
PDPN-210ENST00000513143 C9orf62Q8N4C0 152 aa9.69□□□□□ -0.86
PDPN-210ENST00000513143 ACY3Q96HD9 319 aa9.69□□□□□ -0.86
PDPN-210ENST00000513143 ATP5SQ99766 215 aa9.69□□□□□ -0.86
PDPN-210ENST00000513143 WFDC1Q9HC57 220 aa9.69□□□□□ -0.86
PDPN-210ENST00000513143 GAR1Q9NY12 217 aaKnown RBP9.69□□□□□ -0.86
PDPN-210ENST00000513143 TSSC4Q9Y5U2 329 aaPredicted RBP9.69□□□□□ -0.86
PDPN-210ENST00000513143 IGKV1OR2-108A0A075B7D4 117 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 SMCO3A2RU48 225 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 BOLA2-SMG1P6H3BVE0 249 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 I3L521 148 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 TAAR5O14804 337 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 GNG7O60262 68 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 CLEC3BP05452 202 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 LGALS1P09382 135 aaKnown RBP9.68□□□□□ -0.86
PDPN-210ENST00000513143 NKX2-5P52952 324 aaPredicted RBP9.68□□□□□ -0.86
PDPN-210ENST00000513143 RUNX1Q01196 453 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 AKR1C1Q04828 323 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms