RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PPBPP02775 128 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 OR9G9P0C7N8 305 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 GCSAMLQ5JQS6 135 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 FAM166AQ6J272 317 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 TEX38Q6PEX7 206 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 OCC1Q8TAD7 63 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 KIF26BQ2KJY2 2108 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 H3BRM9 83 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 C17orf82Q86X59 251 aaPredicted RBP10.38□□□□□ -0.75
COL11A1-210ENST00000512756 CYTL1Q9NRR1 136 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 JKAMPQ9P055 326 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 ZNF257Q9Y2Q1 563 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 ZDBF2Q9HCK1 2354 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 GREB1Q4ZG55 1949 aa10.38□□□□□ -0.75
COL11A1-210ENST00000512756 SUPT4H1P63272 117 aaKnown RBP10.38□□□□□ -0.75
COL11A1-210ENST00000512756 ESPL1Q14674 2120 aa10.37□□□□□ -0.75
COL11A1-210ENST00000512756 PCP4P48539 62 aa10.37□□□□□ -0.75
COL11A1-210ENST00000512756 FGFBP3Q8TAT2 258 aa10.37□□□□□ -0.75
COL11A1-210ENST00000512756 BEX4Q9NWD9 120 aaPredicted RBP10.37□□□□□ -0.75
COL11A1-210ENST00000512756 IGHV1-18A0A0C4DH31 117 aa10.37□□□□□ -0.75
COL11A1-210ENST00000512756 LINC00587B1AMM8 73 aa10.37□□□□□ -0.75
COL11A1-210ENST00000512756 FAM168AQ92567 244 aa10.37□□□□□ -0.75
COL11A1-210ENST00000512756 RALGAPA1Q6GYQ0 2036 aa10.37□□□□□ -0.75
COL11A1-210ENST00000512756 ATP5L2Q7Z4Y8 100 aa10.37□□□□□ -0.75
COL11A1-210ENST00000512756 ABCA7Q8IZY2 2146 aa10.37□□□□□ -0.75
COL11A1-210ENST00000512756 TRAV9-2A0A087WT02 112 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 GNG5P63218 68 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 GGNQ86UU5 652 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 PSG8Q9UQ74 426 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 SCN8AQ9UQD0 1980 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 SRRM5B3KS81 715 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 C1QL4Q86Z23 238 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 NXT2Q9NPJ8 142 aaKnown RBP10.36□□□□□ -0.75
COL11A1-210ENST00000512756 RTTNQ86VV8 2226 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 LINC00614P0C842 121 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 STAG3L3P0CL85 134 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 MUC21Q5SSG8 566 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 ST6GALNAC6Q969X2 333 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 CACNA1DQ01668 2161 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 SDK2Q58EX2 2172 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 HAX1O00165 279 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 TMEM50AO95807 157 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 MYOD1P15172 320 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 EMP1P54849 157 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 DMRTA1Q5VZB9 504 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 TREML4Q6UXN2 200 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 TSKUQ8WUA8 353 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 C5orf30Q96GV9 206 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 RPUSD1Q9UJJ7 312 aaKnown RBP10.36□□□□□ -0.75
COL11A1-210ENST00000512756 SPCS1Q9Y6A9 102 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 PINLYPA6NC86 204 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 COLCA2A8K830 154 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 HBDP02042 147 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 OR4X2Q8NGF9 303 aa10.36□□□□□ -0.75
COL11A1-210ENST00000512756 TRIOBPQ9H2D6 2365 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 A0A1B0GWB2 263 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 PYYP10082 97 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 CSRP1P21291 193 aaKnown RBP10.35□□□□□ -0.75
COL11A1-210ENST00000512756 LEPP41159 167 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 CHCHD1Q96BP2 118 aaKnown RBP10.35□□□□□ -0.75
COL11A1-210ENST00000512756 VCX2Q9H322 139 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 SPRR3Q9UBC9 169 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 PSMB11A5LHX3 300 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 SNAI2O43623 268 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 NMSQ5H8A3 153 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 OR13C6PQ8NH95 151 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 C8orf46Q8TAG6 207 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 DUX3Q96PT4 197 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 IGKV3OR2-268A0A0C4DH90 116 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 CACNG7P62955 275 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 FOXL1Q12952 345 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 DMRTA2Q96SC8 542 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 C7orf69Q9H7B7 122 aa10.35□□□□□ -0.75
COL11A1-210ENST00000512756 GGTLC1Q9BX51 225 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 VSIRQ9H7M9 311 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 WDR90Q96KV7 1748 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 MDC1Q14676 2089 aaKnown RBP10.34□□□□□ -0.75
COL11A1-210ENST00000512756 IGKV1-27A0A075B6S5 117 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 TRBV6-6A0A0A6YYG2 114 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 PF4P02776 101 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 RNASE4P34096 147 aaKnown RBP10.34□□□□□ -0.75
COL11A1-210ENST00000512756 SRSF4Q08170 494 aaKnown RBP10.34□□□□□ -0.75
COL11A1-210ENST00000512756 HIST1H2BLQ99880 126 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 SSBP4Q9BWG4 385 aaPredicted RBP10.34□□□□□ -0.75
COL11A1-210ENST00000512756 DOCK6Q96HP0 2047 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 IGHV1-46P01743 117 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 RNASE1P07998 156 aaKnown RBP10.34□□□□□ -0.75
COL11A1-210ENST00000512756 TIMP3P35625 211 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 FOXF2Q12947 444 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 TRAV21A0A0B4J279 112 aa10.34□□□□□ -0.75
COL11A1-210ENST00000512756 SRSF1Q07955 248 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL11A1-210ENST00000512756 PLSCR4Q9NRQ2 329 aa10.33□□□□□ -0.76
COL11A1-210ENST00000512756 TMEM42Q69YG0 159 aa10.33□□□□□ -0.76
COL11A1-210ENST00000512756 TMEM14EPQ6UXP3 125 aa10.33□□□□□ -0.76
COL11A1-210ENST00000512756 PNRC2Q9NPJ4 139 aaKnown RBP10.33□□□□□ -0.76
COL11A1-210ENST00000512756 PEMTQ9UBM1 199 aa10.33□□□□□ -0.76
COL11A1-210ENST00000512756 CLDN16Q9Y5I7 305 aa10.33□□□□□ -0.76
COL11A1-210ENST00000512756 CACNA1EQ15878 2313 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms