RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SUB1P53999 127 aaKnown RBP eCLIP8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 SSBP2P81877 361 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 TMEM267Q0VDI3 215 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 CLINT1Q14677 625 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 SSX2Q16385 188 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 C5orf64Q2M2E5 130 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 ZNF562Q6V9R5 426 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 ETV3LQ6ZN32 361 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 DYNAPQ8N1N2 210 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 LILRB2Q8N423 598 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 TMEM217Q8N7C4 229 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 WFDC9Q8NEX5 89 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 OR1L6Q8NGR2 347 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 RBMXL1Q96E39 390 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 RITA1Q96K30 269 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 ASCL2Q99929 193 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 SMIM3Q9BZL3 60 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 KCNIP2Q9NS61 270 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 KIAA1456Q9P272 454 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 METTL1Q9UBP6 276 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 WDR83OSQ9Y284 106 aa8.23□□□□□ -1.09
PDLIM5-217ENST00000512274 IGHV3-72A0A0B4J1Y9 119 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 TRAV1-1A0A0B4J248 108 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 A0A1B0GW64 132 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 RAB19A4D1S5 217 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 CORTO00230 105 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 ACTL6BO94805 426 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 HLA-DRB1P01911 266 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 MBP02144 154 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 PMS2P11Q13670 270 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 MMDQ15546 238 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 IL34Q6ZMJ4 242 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 OR1P1Q8NH06 330 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 SCGB1C1Q8TD33 95 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 HILPDAQ9Y5L2 63 aa8.22□□□□□ -1.09
PDLIM5-217ENST00000512274 MFSD2BA6NFX1 497 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 TEX22C9J3V5 150 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 H3BUX3 64 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 NDUFS6O75380 124 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 CA2P00918 260 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 CRYGCP07315 174 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 SNCAP37840 140 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 CRIP2P52943 208 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 WT1-ASQ06250 92 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 UQCC3Q6UW78 93 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 C16orf82Q7Z2V1 217 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 TMEM144Q7Z5S9 345 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 HSD17B11Q8NBQ5 300 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 LFNGQ8NES3 379 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 SRSF12Q8WXF0 261 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 TMEM68Q96MH6 324 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 NPVFQ9HCQ7 196 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 TPSG1Q9NRR2 321 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 PLA2G2EQ9NZK7 142 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 PFDN2Q9UHV9 154 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 ZNF580Q9UK33 172 aa8.21□□□□□ -1.1
PDLIM5-217ENST00000512274 NPIPB5A8MRT5 1133 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 E7EUB6 86 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 C17orf112F2Z3M2 114 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 M0QZK8 103 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 PF4P02776 101 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 CNTFRP26992 372 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 FAM74A1Q5RGS3 127 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 ZFAND6Q6FIF0 208 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 OR8G2PQ6IF36 304 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 ETFRF1Q6IPR1 90 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 BTNL8Q6UX41 500 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 OR5R1Q8NH85 324 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 NPCDR1Q9BY65 106 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 FBXL15Q9H469 300 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 SMDT1Q9H4I9 107 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 FBXO7Q9Y3I1 522 aa8.2□□□□□ -1.1
PDLIM5-217ENST00000512274 DNAH9Q9NYC9 4486 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 ZNF705EA8MWA4 302 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 BRI3O95415 125 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 IFNA4P05014 189 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 PF4V1P10720 104 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 TMEM11P17152 192 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 CTRB1P17538 263 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 OPRK1P41145 380 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 RPL29P47914 159 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 EGFEM1PQ0D2K5 195 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 PJVKQ0ZLH3 352 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 TNXAQ16473 311 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 SPINK9Q5DT21 86 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 ARSJQ5FYB0 599 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 PXDC1Q5TGL8 231 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 CTRB2Q6GPI1 263 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 SLC25A24Q6NUK1 477 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 ADAMTSL5Q6ZMM2 481 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 Q8N9W7 124 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 PIFOQ8TCI5 191 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 MBD3L1Q8WWY6 194 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 MARC2Q969Z3 335 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 RCC1LQ96I51 464 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 RBM14Q96PK6 669 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 P2RX4Q99571 388 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 SSX3Q99909 188 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 SH3BGRL3Q9H299 93 aa8.19□□□□□ -1.1
PDLIM5-217ENST00000512274 F11RQ9Y624 299 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms