RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SPAG7O75391 227 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 ZNF324O75467 553 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 IGKV1D-33P01593 117 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 IGKV1-33P01594 117 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 C1QCP02747 245 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 CD37P11049 281 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 PIPP12273 146 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 MIFP14174 115 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 TCP1P17987 556 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 TPBGQ13641 420 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 GINS1Q14691 196 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 SPCS2Q15005 226 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 PTGES3Q15185 160 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 HIST3H3Q16695 136 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 DEFB114Q30KQ6 69 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 GCSAMLQ5JQS6 135 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 MRPL2Q5T653 305 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 DCXRQ7Z4W1 244 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 C10orf107Q8IVU9 208 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 UBAC2Q8NBM4 344 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 PPP1R14BQ96C90 147 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 PPCDCQ96CD2 204 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 ADTRPQ96IZ2 230 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 TEAD3Q99594 435 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 HSPB9Q9BQS6 159 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 SULT4A1Q9BR01 284 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 UQCC2Q9BRT2 126 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 RSG1Q9BU20 258 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 SLC25A2Q9BXI2 301 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 NSRP1Q9H0G5 558 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 RPP21Q9H633 154 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 ACOT13Q9NPJ3 140 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 MED4Q9NPJ6 270 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 KLF12Q9Y4X4 402 aa2.07□□□□□ -2.08
TOPBP1-208ENST00000511439 IGLV1-50A0A075B6I6 118 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 IGKV1D-17A0A075B6S4 117 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 A0A087WTM6 91 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 EXOC1LA0A1B0GW35 172 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 LY6LH3BQJ8 138 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 BUB1B-PAK6H3BSN5 160 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 M0QXV9 152 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 CDIPTO14735 213 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 WISP3O95389 354 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 EIF4EP06730 217 aaKnown RBP2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 TLX1NBP0CAT3 122 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 OCM2P0CE71 109 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 RD3LP0DJH9 198 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 HLA-GP17693 338 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 RAB3AP20336 220 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 MAGEA3P43357 314 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 CDC34P49427 236 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 CCL18P55774 89 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 TPPP2P59282 170 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 RPL37AP61513 92 aaKnown RBP2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 PRR3P79522 188 aaKnown RBP2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 ERCC8Q13216 396 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 ZSCAN26Q16670 478 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 HLA-DRB5Q30154 266 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 C12orf74Q32Q52 190 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 SPANXN3Q5MJ09 141 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 SYT6Q5T7P8 510 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 HES5Q5TA89 166 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 OR2T5Q6IEZ7 315 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 Q6ZRN7 208 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 OLIG3Q7RTU3 272 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 HMGN2P46Q86SG4 172 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 FUNDC1Q8IVP5 155 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 BOD1L2Q8IYS8 172 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 C4orf33Q8N1A6 199 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 ARRDC1Q8N5I2 433 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 TCTEX1D1Q8N7M0 179 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 C15orf56Q8N910 161 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 OR1M1Q8NGA1 313 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 OR2T29Q8NH02 315 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 SFXN5Q8TD22 340 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 OR5P2Q8WZ92 322 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 RDH12Q96NR8 316 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 PDCD1LG2Q9BQ51 273 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 PARP11Q9NR21 331 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 CYTL1Q9NRR1 136 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 ATPIF1Q9UII2 106 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 ZNF222Q9UK12 451 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 PYCARDQ9ULZ3 195 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 ZNF257Q9Y2Q1 563 aa2.06□□□□□ -2.08
TOPBP1-208ENST00000511439 GPR98Q8WXG9 6306 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 TRAV8-4A0A0B4J246 113 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 FAM240AA0A1B0GVK7 77 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 A0A1B0GW64 132 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 OR6C6A6NF89 314 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 CD300LBA8K4G0 201 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 INS-IGF2F8WCM5 200 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 TNFRSF11BO00300 401 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 MYL12BO14950 172 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 UBDO15205 165 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 TCAPO15273 167 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 MED6O75586 246 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 PTTG1O95997 202 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 P01737 135 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 ORM1P02763 201 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms