RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SIGLECL1Q8N7X8 197 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 OSTCQ9NRP0 149 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 MICAL3Q7RTP6 2002 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 ANAPC1Q9H1A4 1944 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 COL6A6A6NMZ7 2263 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 HECW2Q9P2P5 1572 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 TRAV1-1A0A0B4J248 108 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 KPNA3O00505 521 aaPredicted RBP0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 CTSDP07339 412 aaPredicted RBP0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 RBP1P09455 135 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 SMIM10L2AP0DMW4 78 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 SMIM10L2BP0DMW5 78 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 CDC42P60953 191 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 TEX36Q5VZQ5 186 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 TRAPPC6BQ86SZ2 158 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 MNS1Q8NEH6 495 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR4C6Q8NH72 309 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 BORCS7Q96B45 105 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 TRIM4Q9C037 500 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR51V1Q9H2C8 321 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 RIC1Q4ADV7 1423 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 HECW1Q76N89 1606 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 DIDO1Q9BTC0 2240 aaKnown RBP0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 STRCQ7RTU9 1775 aa0.96□□□□□ -2.26
TRAPPC11-207ENST00000511409 A0A087WUJ7 227 aa0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 GEMIN2O14893 280 aaKnown RBP0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 MGST1P10620 155 aaKnown RBP0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 COX6A1P12074 109 aa0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 RNASE3P12724 160 aaKnown RBP0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 CDKN2CP42773 168 aa0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 RNASE10Q5GAN6 216 aaKnown RBP0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 LINC00311Q8N616 119 aa0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR52R1Q8NGF1 315 aa0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 CT55Q8WUE5 264 aa0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 GPR146Q96CH1 333 aa0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 ODF3Q96PU9 254 aa0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 DCSTAMPQ9H295 470 aa0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 PRELID3BQ9Y3B1 194 aa0.95□□□□□ -2.26
TRAPPC11-207ENST00000511409 PLB1Q6P1J6 1458 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 TENM1Q9UKZ4 2725 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 hCG_1818297A0A087WSY0 165 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 hADV38S2A0JD32 116 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 SMIM9A6NGZ8 99 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 A8MT66 165 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 TCRBP04435 133 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 SMIM17P0DL12 118 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 CASP1P29466 404 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 LSM6P62312 80 aaKnown RBP0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 RANP62826 216 aaKnown RBP0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 EDDM3AQ14507 147 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 SPA17Q15506 151 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 RGS21Q2M5E4 152 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR6V1Q8N148 313 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 GDPD1Q8N9F7 314 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 C20orf27Q9GZN8 174 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 C14orf105Q9NVL8 296 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 TAS2R4Q9NYW5 299 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 GLTPQ9NZD2 209 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 ALPK2Q86TB3 2170 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 ECM29Q5VYK3 1845 aa0.94□□□□□ -2.26
TRAPPC11-207ENST00000511409 DLG5Q8TDM6 1919 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 MYO3BQ8WXR4 1341 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 POLEQ07864 2286 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 A0A087WX48 190 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 C2orf70A6NJV1 201 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 C1orf196B1AJZ1 125 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 TMEM114B3SHH9 223 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 SULT1B1O43704 296 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 PDE6DO43924 150 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR1I1O60431 355 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR2B3O76000 313 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR2J2O76002 312 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 UBL3O95164 117 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 BAALC-AS2P0C853 105 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 ZNF93P35789 620 aaPredicted RBP0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 SSR2P43308 183 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 DEFA3P59666 94 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 YPEL3P61236 119 aaPredicted RBP0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 RHOBP62745 196 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 SRSF6Q13247 344 aaKnown RBP0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 IAH1Q2TAA2 248 aaPredicted RBP0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 RNASE7Q9H1E1 156 aaKnown RBP0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 MIXL1Q9H2W2 232 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 UQCC1Q9NVA1 299 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 KLK9Q9UKQ9 250 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 CYSLTR1Q9Y271 337 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 SLC35A3Q9Y2D2 325 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 ROBO3Q96MS0 1386 aa0.93□□□□□ -2.26
TRAPPC11-207ENST00000511409 TRBV6-7A0A0A0MS04 114 aa0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 TRAV3A0A0B4J244 114 aa0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR2T1O43869 369 aa0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 HYPMO75409 117 aa0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 PROSCO94903 275 aa0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 PPIBP23284 216 aaKnown RBP0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 RAB4BP61018 213 aa0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 C12orf74Q32Q52 190 aa0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 LINC01554Q52M75 96 aa0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR51A2Q8NGJ7 313 aa0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 OR13D1Q8NGV5 346 aa0.92□□□□□ -2.26
TRAPPC11-207ENST00000511409 SLC25A40Q8TBP6 338 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms