RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 LYRM1O43325 122 aa10.54□□□□□ -0.72
DDX41-212ENST00000511040 YIF1AO95070 293 aa10.54□□□□□ -0.72
DDX41-212ENST00000511040 SCAF4O95104 1147 aaKnown RBP10.54□□□□□ -0.72
DDX41-212ENST00000511040 FCGR2BP31994 310 aaPredicted RBP10.54□□□□□ -0.72
DDX41-212ENST00000511040 TMEM61Q8N0U2 210 aa10.54□□□□□ -0.72
DDX41-212ENST00000511040 OR2K2Q8NGT1 345 aa10.54□□□□□ -0.72
DDX41-212ENST00000511040 TMEM170AQ8WVE7 144 aa10.54□□□□□ -0.72
DDX41-212ENST00000511040 HIPK2Q9H2X6 1198 aa10.54□□□□□ -0.72
DDX41-212ENST00000511040 HSPB7Q9UBY9 170 aa10.54□□□□□ -0.72
DDX41-212ENST00000511040 IGHV3-49A0A0A0MS15 119 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 OR4E1P0C645 316 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 FRMD6-AS1P0C7T7 363 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 C8orf88P0DMB2 117 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 NPY1RP25929 384 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 NPBWR1P48145 328 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 ELLP55199 621 aaPredicted RBP10.53□□□□□ -0.72
DDX41-212ENST00000511040 UBE2MP61081 183 aaKnown RBP10.53□□□□□ -0.72
DDX41-212ENST00000511040 RELQ04864 619 aaPredicted RBP10.53□□□□□ -0.72
DDX41-212ENST00000511040 DHRS2Q13268 280 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 C4orf46Q504U0 113 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 C2orf83Q53S99 150 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 GGNBP1Q5YKI7 109 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 LINC00299Q6ZSB3 139 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 GTSCR1Q86UQ5 136 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 DTD1Q8TEA8 209 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 S100ZQ8WXG8 99 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 CCDC32Q9BV29 185 aa10.53□□□□□ -0.72
DDX41-212ENST00000511040 DAZ1Q9NQZ3 744 aaKnown RBP10.53□□□□□ -0.72
DDX41-212ENST00000511040 MRPL27Q9P0M9 148 aaKnown RBP10.53□□□□□ -0.72
DDX41-212ENST00000511040 DNAH9Q9NYC9 4486 aa10.52□□□□□ -0.72
DDX41-212ENST00000511040 PIGBOS1A0A0B4J2F0 54 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 PITX3O75364 302 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 ADAP1O75689 374 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 TMEM50AO95807 157 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 IFNA10P01566 189 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 IGHV4-30-4P0DP06 118 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 IAPPP10997 89 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 CD81P60033 236 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 LYG2Q86SG7 212 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 OR52B4Q8NGK2 314 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 MARC2Q969Z3 335 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 MAGT1Q9H0U3 335 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 C20orf85Q9H1P6 137 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 CACFD1Q9UGQ2 172 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 TMED3Q9Y3Q3 217 aa10.52□□□□□ -0.73
DDX41-212ENST00000511040 TRAV6A0A075B6T7 132 aa10.51□□□□□ -0.73
DDX41-212ENST00000511040 IGHV3OR16-13A0A075B7E8 117 aa10.51□□□□□ -0.73
DDX41-212ENST00000511040 IGHV3-74A0A0B4J1X5 117 aa10.51□□□□□ -0.73
DDX41-212ENST00000511040 RPS10-NUDT3A0A1W2PQS6 291 aa10.51□□□□□ -0.73
DDX41-212ENST00000511040 CD7P09564 240 aa10.51□□□□□ -0.73
DDX41-212ENST00000511040 TOMM20LQ6UXN7 152 aa10.51□□□□□ -0.73
DDX41-212ENST00000511040 SBSPONQ8IVN8 264 aa10.51□□□□□ -0.73
DDX41-212ENST00000511040 COQ8AQ8NI60 647 aa10.51□□□□□ -0.73
DDX41-212ENST00000511040 NEURL2Q9BR09 285 aa10.51□□□□□ -0.73
DDX41-212ENST00000511040 WFDC10AQ9H1F0 79 aa10.51□□□□□ -0.73
DDX41-212ENST00000511040 C15orf62A8K5M9 175 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 MPTX1A8MV57 137 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 K7EMT4 169 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 CLN5O75503 358 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 TCRBP04435 133 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 SLC25A6P12236 298 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 RND2P52198 227 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 IFITM3Q01628 133 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 TIGITQ495A1 244 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 PRSS54Q6PEW0 395 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 RBPMS2Q6ZRY4 209 aaKnown RBP10.5□□□□□ -0.73
DDX41-212ENST00000511040 OR4X1Q8NH49 305 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 RNASEH2CQ8TDP1 164 aaKnown RBP10.5□□□□□ -0.73
DDX41-212ENST00000511040 TUBA4BQ9H853 241 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 NUDT15Q9NV35 164 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 TBC1D24Q9ULP9 559 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 PAIP2BQ9ULR5 123 aaKnown RBP10.5□□□□□ -0.73
DDX41-212ENST00000511040 PUS1Q9Y606 427 aaKnown RBP eCLIP10.5□□□□□ -0.73
DDX41-212ENST00000511040 U3KQ87 197 aa10.5□□□□□ -0.73
DDX41-212ENST00000511040 IGHV7-4-1A0A0J9YVY3 117 aa10.49□□□□□ -0.73
DDX41-212ENST00000511040 IFNA4P05014 189 aa10.49□□□□□ -0.73
DDX41-212ENST00000511040 ZNF846Q147U1 533 aa10.49□□□□□ -0.73
DDX41-212ENST00000511040 ZNF600Q6ZNG1 722 aa10.49□□□□□ -0.73
DDX41-212ENST00000511040 SLC16A13Q7RTY0 426 aa10.49□□□□□ -0.73
DDX41-212ENST00000511040 DEFB125Q8N687 156 aa10.49□□□□□ -0.73
DDX41-212ENST00000511040 TMEM116Q8NCL8 245 aa10.49□□□□□ -0.73
DDX41-212ENST00000511040 ACY3Q96HD9 319 aa10.49□□□□□ -0.73
DDX41-212ENST00000511040 OR10C1Q96KK4 312 aa10.49□□□□□ -0.73
DDX41-212ENST00000511040 WDR12Q9GZL7 423 aaKnown RBP10.49□□□□□ -0.73
DDX41-212ENST00000511040 C19orf73Q9NVV2 129 aa10.49□□□□□ -0.73
DDX41-212ENST00000511040 SMPXQ9UHP9 88 aa10.49□□□□□ -0.73
DDX41-212ENST00000511040 COL7A1Q02388 2944 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 IGHV3-66A0A0C4DH42 116 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 WRBO00258 174 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 CHEK1O14757 476 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 MED6O75586 246 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 IFNA21P01568 189 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 IGKV1-17P01599 117 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 NHLRC4P0CG21 123 aaPredicted RBP10.48□□□□□ -0.73
DDX41-212ENST00000511040 SLC25A4P12235 298 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 NOXA1Q86UR1 476 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 NPIPB3Q92617 1050 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 SEC22CQ9BRL7 303 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 RHPN1-AS1Q9BWJ2 59 aa10.48□□□□□ -0.73
DDX41-212ENST00000511040 ZFAND3Q9H8U3 227 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms