RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SNCAP37840 140 aa7.58□□□□□ -1.2
DDX41-211ENST00000510171 RPL11P62913 178 aaKnown RBP7.58□□□□□ -1.2
DDX41-211ENST00000510171 MEF2DQ14814 521 aa7.58□□□□□ -1.2
DDX41-211ENST00000510171 LEMD1Q68G75 181 aa7.58□□□□□ -1.2
DDX41-211ENST00000510171 STHQ8IWL8 128 aa7.58□□□□□ -1.2
DDX41-211ENST00000510171 DUSP18Q8NEJ0 188 aa7.58□□□□□ -1.2
DDX41-211ENST00000510171 TP53RKQ96S44 253 aa7.58□□□□□ -1.2
DDX41-211ENST00000510171 GINS3Q9BRX5 216 aa7.58□□□□□ -1.2
DDX41-211ENST00000510171 PDCD10Q9BUL8 212 aa7.58□□□□□ -1.2
DDX41-211ENST00000510171 MS4A6AQ9H2W1 248 aa7.58□□□□□ -1.2
DDX41-211ENST00000510171 RABL2AQ9UBK7 228 aaPredicted RBP7.58□□□□□ -1.2
DDX41-211ENST00000510171 RABL2BQ9UNT1 228 aa7.58□□□□□ -1.2
DDX41-211ENST00000510171 KMT2AQ03164 3969 aa7.58□□□□□ -1.2
DDX41-211ENST00000510171 IGHV4-28A0A0C4DH34 117 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 CORTO00230 105 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 ST8SIA3O43173 380 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 GNG7O60262 68 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 MT-CO2P00403 227 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 IFNA17P01571 189 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 IGKV1-5P01602 117 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 IGHV3-48P01763 117 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 RBMY1A1P0DJD3 496 aaKnown RBP7.57□□□□□ -1.2
DDX41-211ENST00000510171 RBMY1CP0DJD4 496 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 MED14OSP0DP75 135 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 HLA-DMBP28068 263 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 ALDH3B2P48448 385 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 PPP5CP53041 499 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 SUB1P53999 127 aaKnown RBP eCLIP7.57□□□□□ -1.2
DDX41-211ENST00000510171 RBMY1FQ15415 496 aaKnown RBP7.57□□□□□ -1.2
DDX41-211ENST00000510171 SURF2Q15527 256 aaPredicted RBP7.57□□□□□ -1.2
DDX41-211ENST00000510171 TRIM16LQ309B1 348 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 SCGB2B2Q4G0G5 96 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 TMEM41BQ5BJD5 291 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 STEAP1BQ6NZ63 245 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 TOMM20LQ6UXN7 152 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 LILRB2Q8N423 598 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 SLC35G3Q8N808 338 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 Q8NAQ8 132 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 OR4D10Q8NGI6 311 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 OR13C8Q8NGS7 320 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 ST8SIA2Q92186 375 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 RRNAD1Q96FB5 475 aaKnown RBP7.57□□□□□ -1.2
DDX41-211ENST00000510171 BCL7BQ9BQE9 202 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 KIAA1109Q2LD37 5005 aa7.57□□□□□ -1.2
DDX41-211ENST00000510171 IGHV4-4A0A075B6R2 117 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 TRAV2A0A0B4J234 112 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 TRAV10A0A0B4J240 114 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 A0A0B4J293 547 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 IGHV3-66A0A0C4DH42 116 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 APOHP02749 345 aaPredicted RBP7.56□□□□□ -1.2
DDX41-211ENST00000510171 P0C879 139 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 MIFP14174 115 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 UCP1P25874 307 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 NPBWR1P48145 328 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 IZUMO4Q1ZYL8 232 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 Q6ZTC4 211 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 FAM219AQ8IW50 185 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 RNASE11Q8TAA1 199 aaKnown RBP7.56□□□□□ -1.2
DDX41-211ENST00000510171 MARCH1Q8TCQ1 289 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 RAB2BQ8WUD1 216 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 SMIM4Q8WVI0 70 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 PINX1Q96BK5 328 aaKnown RBP7.56□□□□□ -1.2
DDX41-211ENST00000510171 TMEM222Q9H0R3 208 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 MIXL1Q9H2W2 232 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 VSIRQ9H7M9 311 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 ENY2Q9NPA8 101 aa7.56□□□□□ -1.2
DDX41-211ENST00000510171 C14orf166Q9Y224 244 aaKnown RBP7.56□□□□□ -1.2
DDX41-211ENST00000510171 A0A1B0GVY2 172 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 DISC1C4P0D8 188 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 CTDSP2O14595 271 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 CTDSPLO15194 276 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 SCGB2A1O75556 95 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 GIG44P09565 113 aaPredicted RBP7.55□□□□□ -1.2
DDX41-211ENST00000510171 SPP1P10451 314 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 HOXA1P49639 335 aaPredicted RBP7.55□□□□□ -1.2
DDX41-211ENST00000510171 TMBIM6P55061 237 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 SPCS2Q15005 226 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 SP6Q3SY56 376 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 PVRIGQ6DKI7 326 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 MORN3Q6PF18 240 aaPredicted RBP7.55□□□□□ -1.2
DDX41-211ENST00000510171 FAM24BQ8N5W8 94 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 DIRAS2Q96HU8 199 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 PRRT1Q99946 306 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 RNF126Q9BV68 326 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 TMEM231Q9H6L2 316 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 CCDC59Q9P031 241 aaKnown RBP7.55□□□□□ -1.2
DDX41-211ENST00000510171 CACFD1Q9UGQ2 172 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 RABAC1Q9UI14 185 aa7.55□□□□□ -1.2
DDX41-211ENST00000510171 PUS1Q9Y606 427 aaKnown RBP eCLIP7.55□□□□□ -1.2
DDX41-211ENST00000510171 TEX13DA0A0J9YY54 714 aaPredicted RBP7.54□□□□□ -1.2
DDX41-211ENST00000510171 A0A1W2PS18 150 aa7.54□□□□□ -1.2
DDX41-211ENST00000510171 PRSS29PA6NIE9 313 aa7.54□□□□□ -1.2
DDX41-211ENST00000510171 ZNF705EA8MWA4 302 aaPredicted RBP7.54□□□□□ -1.2
DDX41-211ENST00000510171 CDS2O95674 445 aa7.54□□□□□ -1.2
DDX41-211ENST00000510171 AKAIN1P0CW23 69 aa7.54□□□□□ -1.2
DDX41-211ENST00000510171 NPPCP23582 126 aa7.54□□□□□ -1.2
DDX41-211ENST00000510171 ETV6P41212 452 aa7.54□□□□□ -1.2
DDX41-211ENST00000510171 DHODHQ02127 395 aa7.54□□□□□ -1.2
DDX41-211ENST00000510171 IL18Q14116 193 aa7.54□□□□□ -1.2
DDX41-211ENST00000510171 AARDQ4LEZ3 155 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms