RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 F6UB75 175 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 LINC01619G3V211 115 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 GABARAPH6UMI1 98 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 J3QT63 122 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 LYZL6O75951 148 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 NDUFB6O95139 128 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 DUSP14O95147 198 aaKnown RBP3.55□□□□□ -1.84
NIPBL-206ENST00000509429 GADD45AP24522 165 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 BTCP35070 178 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 SAA4P35542 130 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 TMEM258P61165 79 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 DAD1P61803 113 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 PPP1CAP62136 330 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 RPS23P62266 143 aaKnown RBP3.55□□□□□ -1.84
NIPBL-206ENST00000509429 DYNLT1P63172 113 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 HLA-DRB3P79483 266 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 CFHR3Q02985 330 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 ATP5G2Q06055 141 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 TMEM30BQ3MIR4 351 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 KRTAP13-3Q3SY46 172 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 KLF17Q5JT82 389 aaPredicted RBP3.55□□□□□ -1.84
NIPBL-206ENST00000509429 FAM120AOSQ5T036 256 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 BVES-AS1Q5T3Y7 98 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 ZNF329Q86UD4 541 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 NR2C2APQ86WQ0 139 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 GVQW1Q8N7I0 195 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 LY6G5BQ8NDX9 201 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 SGMS2Q8NHU3 365 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 C2orf15Q8WU43 125 aaKnown RBP3.55□□□□□ -1.84
NIPBL-206ENST00000509429 S100A16Q96FQ6 103 aaKnown RBP3.55□□□□□ -1.84
NIPBL-206ENST00000509429 IGF2BP2-AS1Q96M15 143 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 RTL8AQ9BWD3 113 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 AICDAQ9GZX7 198 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 SMDT1Q9H4I9 107 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 OTORQ9NRC9 128 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 TXNL4BQ9NX01 149 aaKnown RBP3.55□□□□□ -1.84
NIPBL-206ENST00000509429 RARRES3Q9UL19 164 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 WASHC3Q9Y3C0 194 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 FIS1Q9Y3D6 152 aa3.55□□□□□ -1.84
NIPBL-206ENST00000509429 AMMECR1Q9Y4X0 333 aaPredicted RBP3.55□□□□□ -1.84
NIPBL-206ENST00000509429 COL11A1P12107 1806 aaPredicted RBP3.55□□□□□ -1.84
NIPBL-206ENST00000509429 TRBV24-1A0A075B6N3 115 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 TRAV27A0A087WT01 109 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 TRAV19A0A0A6YYK7 116 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.54□□□□□ -1.84
NIPBL-206ENST00000509429 LINC01553A4QN01 128 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 M0R2P5 195 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 UQCRQO14949 82 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 SOCS1O15524 211 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 MT-ND6P03923 174 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 EIF4EP06730 217 aaKnown RBP3.54□□□□□ -1.84
NIPBL-206ENST00000509429 FCGR3AP08637 254 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 CECR9P0C854 216 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 FGF3P11487 239 aaPredicted RBP3.54□□□□□ -1.84
NIPBL-206ENST00000509429 PPIBP23284 216 aaKnown RBP3.54□□□□□ -1.84
NIPBL-206ENST00000509429 CA7P43166 264 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 VDAC2P45880 294 aaPredicted RBP3.54□□□□□ -1.84
NIPBL-206ENST00000509429 ATP4BP51164 291 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 GFERP55789 205 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 RPS11P62280 158 aaKnown RBP eCLIP3.54□□□□□ -1.84
NIPBL-206ENST00000509429 LSM3P62310 102 aaKnown RBP3.54□□□□□ -1.84
NIPBL-206ENST00000509429 POU3F1Q03052 451 aaPredicted RBP3.54□□□□□ -1.84
NIPBL-206ENST00000509429 RTL8BQ17RB0 113 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 ECSCRQ19T08 205 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 VMA21Q3ZAQ7 101 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 SPATA45Q537H7 98 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 UBE2NLQ5JXB2 153 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 ZNF880Q6PDB4 577 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 ZNF493Q6ZR52 646 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 PRR15Q8IV56 129 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 DEFB107AQ8IZN7 70 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 C10orf126Q8N4M7 172 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 ZIC4Q8N9L1 334 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 OTOSQ8NHW6 89 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 SCGB1C1Q8TD33 95 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 FGF11Q92914 225 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 MS4A6EQ96DS6 147 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 DNAJA3Q96EY1 480 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 BORCS8Q96FH0 119 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 ZC2HC1AQ96GY0 325 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 AQP10Q96PS8 301 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 NMNAT3Q96T66 252 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 PLA2G2FQ9BZM2 168 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 GNB4Q9HAV0 340 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 TMEM242Q9NWH2 141 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 NUDT4Q9NZJ9 180 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 MARCOQ9UEW3 520 aaPredicted RBP3.54□□□□□ -1.84
NIPBL-206ENST00000509429 ZNF256Q9Y2P7 627 aaPredicted RBP3.54□□□□□ -1.84
NIPBL-206ENST00000509429 CHCHD2Q9Y6H1 151 aaPredicted RBP3.54□□□□□ -1.84
NIPBL-206ENST00000509429 SBF1O95248 1867 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 TSC2P49815 1807 aa3.54□□□□□ -1.84
NIPBL-206ENST00000509429 TNS1Q9HBL0 1735 aaKnown RBP3.53□□□□□ -1.84
NIPBL-206ENST00000509429 MUC21A0A0G2JKD1 596 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 LOC101059948A0A1B0GTJ6 334 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 LOC107986453A0A1B0GWG9 222 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 ZNF727A8MUV8 499 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 XKRYO14609 159 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 PDCD6O75340 191 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 DEDDO75618 318 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 PMS2P2O95744 297 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms