RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 PJVKQ0ZLH3 352 aa11.27□□□□□ -0.61
HMGCL-208ENST00000509389 TMEM170AQ8WVE7 144 aa11.27□□□□□ -0.61
HMGCL-208ENST00000509389 BSCL2Q96G97 398 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-208ENST00000509389 SRSF8Q9BRL6 282 aaKnown RBP11.27□□□□□ -0.61
HMGCL-208ENST00000509389 FBXL15Q9H469 300 aa11.27□□□□□ -0.61
HMGCL-208ENST00000509389 PSENENQ9NZ42 101 aa11.27□□□□□ -0.61
HMGCL-208ENST00000509389 KIAA1456Q9P272 454 aa11.27□□□□□ -0.61
HMGCL-208ENST00000509389 FBXO7Q9Y3I1 522 aa11.27□□□□□ -0.61
HMGCL-208ENST00000509389 KANTRA0A1W2PQU2 76 aa11.26□□□□□ -0.61
HMGCL-208ENST00000509389 CEBPZOSA8MTT3 80 aa11.26□□□□□ -0.61
HMGCL-208ENST00000509389 H3BP45 60 aa11.26□□□□□ -0.61
HMGCL-208ENST00000509389 ATP5IP56385 69 aaPredicted RBP11.26□□□□□ -0.61
HMGCL-208ENST00000509389 NDPQ00604 133 aa11.26□□□□□ -0.61
HMGCL-208ENST00000509389 C19orf54Q5BKX5 351 aa11.26□□□□□ -0.61
HMGCL-208ENST00000509389 C10orf55Q5SWW7 151 aa11.26□□□□□ -0.61
HMGCL-208ENST00000509389 ZNF114Q8NC26 417 aa11.26□□□□□ -0.61
HMGCL-208ENST00000509389 COMMD5Q9GZQ3 224 aa11.26□□□□□ -0.61
HMGCL-208ENST00000509389 ARV1Q9H2C2 271 aa11.26□□□□□ -0.61
HMGCL-208ENST00000509389 IGLC7A0M8Q6 106 aa11.25□□□□□ -0.61
HMGCL-208ENST00000509389 TEX22C9J3V5 150 aa11.25□□□□□ -0.61
HMGCL-208ENST00000509389 SOX15O60248 233 aa11.25□□□□□ -0.61
HMGCL-208ENST00000509389 CRIP2P52943 208 aaPredicted RBP11.25□□□□□ -0.61
HMGCL-208ENST00000509389 AP2S1P53680 142 aaPredicted RBP11.25□□□□□ -0.61
HMGCL-208ENST00000509389 NHLH2Q02577 135 aa11.25□□□□□ -0.61
HMGCL-208ENST00000509389 ECSCRQ19T08 205 aa11.25□□□□□ -0.61
HMGCL-208ENST00000509389 STX12Q86Y82 276 aa11.25□□□□□ -0.61
HMGCL-208ENST00000509389 UBAC2Q8NBM4 344 aa11.25□□□□□ -0.61
HMGCL-208ENST00000509389 PLEKHA3Q9HB20 300 aa11.25□□□□□ -0.61
HMGCL-208ENST00000509389 STRAPQ9Y3F4 350 aaKnown RBP11.25□□□□□ -0.61
HMGCL-208ENST00000509389 U3KQ87 197 aa11.25□□□□□ -0.61
HMGCL-208ENST00000509389 A0A1W2PN81 502 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 OVOL1O14753 267 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 CHRNA7P36544 502 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 RPL27AP46776 148 aaKnown RBP11.24□□□□□ -0.61
HMGCL-208ENST00000509389 HOXA1P49639 335 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-208ENST00000509389 CX3CL1P78423 397 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 ARL16Q0P5N6 197 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 VWC2Q2TAL6 325 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 C2orf83Q53S99 150 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 SPINK9Q5DT21 86 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 SPANXN5Q5MJ07 72 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 TEX261Q6UWH6 196 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 HSD17B13Q7Z5P4 300 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-208ENST00000509389 SLC24A4Q8NFF2 622 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 DLX4Q92988 240 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-208ENST00000509389 PARD6GQ9BYG4 376 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-208ENST00000509389 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 SMAD5-AS1Q9Y6J3 95 aa11.24□□□□□ -0.61
HMGCL-208ENST00000509389 HUWE1Q7Z6Z7 4374 aaKnown RBP11.23□□□□□ -0.61
HMGCL-208ENST00000509389 FCN1O00602 326 aa11.23□□□□□ -0.61
HMGCL-208ENST00000509389 CFDP00746 253 aaPredicted RBP11.23□□□□□ -0.61
HMGCL-208ENST00000509389 CA2P00918 260 aa11.23□□□□□ -0.61
HMGCL-208ENST00000509389 RNASE2P10153 161 aaKnown RBP11.23□□□□□ -0.61
HMGCL-208ENST00000509389 EGR2P11161 476 aaPredicted RBP11.23□□□□□ -0.61
HMGCL-208ENST00000509389 SLURP1P55000 103 aa11.23□□□□□ -0.61
HMGCL-208ENST00000509389 TMEM267Q0VDI3 215 aaPredicted RBP11.23□□□□□ -0.61
HMGCL-208ENST00000509389 OR5C1Q8NGR4 320 aa11.23□□□□□ -0.61
HMGCL-208ENST00000509389 SRSF12Q8WXF0 261 aaKnown RBP11.23□□□□□ -0.61
HMGCL-208ENST00000509389 ST8SIA2Q92186 375 aa11.23□□□□□ -0.61
HMGCL-208ENST00000509389 PHYHIPLQ96FC7 376 aa11.23□□□□□ -0.61
HMGCL-208ENST00000509389 HIPK2Q9H2X6 1198 aa11.23□□□□□ -0.61
HMGCL-208ENST00000509389 HEYLQ9NQ87 328 aaPredicted RBP11.23□□□□□ -0.61
HMGCL-208ENST00000509389 LINC01619G3V211 115 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 SAP30O75446 220 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 JTBO76095 146 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 CST7O76096 145 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 METTL15P1P0C7V9 234 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 NPY1RP25929 384 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 HTR2BP41595 481 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 HBG1P69891 147 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 HBG2P69892 147 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 RPP30P78346 268 aaKnown RBP11.22□□□□□ -0.61
HMGCL-208ENST00000509389 PLGLAQ15195 96 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 TNXAQ16473 311 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 RPL7L1Q6DKI1 246 aaKnown RBP11.22□□□□□ -0.61
HMGCL-208ENST00000509389 ZNF562Q6V9R5 426 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 ZNF767PQ75MW2 155 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 OR10W1Q8NGF6 305 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 CLCC1Q96S66 551 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 GGACTQ9BVM4 153 aa11.22□□□□□ -0.61
HMGCL-208ENST00000509389 IGHV4OR15-8A0A075B7B6 117 aa11.21□□□□□ -0.61
HMGCL-208ENST00000509389 A0A087WW49 117 aa11.21□□□□□ -0.61
HMGCL-208ENST00000509389 FNDC10F2Z333 226 aa11.21□□□□□ -0.61
HMGCL-208ENST00000509389 C3orf84H3BNL1 204 aa11.21□□□□□ -0.61
HMGCL-208ENST00000509389 LGALS1P09382 135 aaKnown RBP11.21□□□□□ -0.61
HMGCL-208ENST00000509389 ZNF266Q14584 549 aa11.21□□□□□ -0.61
HMGCL-208ENST00000509389 SBSPONQ8IVN8 264 aa11.21□□□□□ -0.61
HMGCL-208ENST00000509389 ZNF680Q8NEM1 530 aa11.21□□□□□ -0.61
HMGCL-208ENST00000509389 OR1S2Q8NGQ3 325 aa11.21□□□□□ -0.61
HMGCL-208ENST00000509389 ABHD5Q8WTS1 349 aa11.21□□□□□ -0.61
HMGCL-208ENST00000509389 ATP5SQ99766 215 aa11.21□□□□□ -0.61
HMGCL-208ENST00000509389 FAM103A1Q9BTL3 118 aaKnown RBP11.21□□□□□ -0.61
HMGCL-208ENST00000509389 ZNF471Q9BX82 626 aaPredicted RBP11.21□□□□□ -0.61
HMGCL-208ENST00000509389 DFFBO76075 338 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 ACTL6BO94805 426 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 TPT1P13693 172 aaKnown RBP11.2□□□□□ -0.62
HMGCL-208ENST00000509389 EIF5AP63241 154 aaKnown RBP11.2□□□□□ -0.62
HMGCL-208ENST00000509389 SLC38A11Q08AI6 406 aa11.2□□□□□ -0.62
HMGCL-208ENST00000509389 EXOSC2Q13868 293 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms