RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 ERHP84090 104 aaKnown RBP1.68□□□□□ -2.14
USP53-204ENST00000507906 SPA17Q15506 151 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 DHRS4L2Q6PKH6 230 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 KTN1-AS1Q86SY8 53 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 OOSP2Q86WS3 158 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 BPIFA4PQ86YQ2 179 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 KRT222Q8N1A0 295 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 TERB2Q8NHR7 220 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 PAIP2Q9BPZ3 127 aaKnown RBP1.68□□□□□ -2.14
USP53-204ENST00000507906 C9orf16Q9BUW7 83 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 CHST6Q9GZX3 395 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 MYH11P35749 1972 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 KNDC1Q76NI1 1749 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 RALGAPBQ86X10 1494 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 DLG5Q8TDM6 1919 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 KDM5AP29375 1690 aaKnown RBP1.67□□□□□ -2.14
USP53-204ENST00000507906 PREX1Q8TCU6 1659 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 FMN1Q68DA7 1419 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 FGD6Q6ZV73 1430 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 ANKRD50Q9ULJ7 1429 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 ABCA10Q8WWZ4 1543 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 MYH10P35580 1976 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 IGLV3-9A0A075B6K5 115 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 TRAV9-1A0A075B6T8 112 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 hCG_1818297A0A087WSY0 165 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 A8MT66 165 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 SERPINE1P05121 402 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 S100A5P33763 92 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 PSMD8P48556 350 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 EIF2B2P49770 351 aaKnown RBP1.67□□□□□ -2.14
USP53-204ENST00000507906 TMEM258P61165 79 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 DEFB103AP81534 67 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 GLO1Q04760 184 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 TMED2Q15363 201 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 TEX36Q5VZQ5 186 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 RPL22L1Q6P5R6 122 aaKnown RBP1.67□□□□□ -2.14
USP53-204ENST00000507906 CLVS1Q8IUQ0 354 aaPredicted RBP1.67□□□□□ -2.14
USP53-204ENST00000507906 C9orf163Q8N9P6 203 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 DCANP1Q8TF63 244 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 HSPB9Q9BQS6 159 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 KIFC1Q9BW19 673 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 C20orf27Q9GZN8 174 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 ARMC1Q9NVT9 282 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 LAMA4Q16363 1823 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 CAMSAP2Q08AD1 1489 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 TCOF1Q13428 1488 aaKnown RBP1.67□□□□□ -2.14
USP53-204ENST00000507906 EIF4G3O43432 1585 aaKnown RBP1.67□□□□□ -2.14
USP53-204ENST00000507906 CUL7Q14999 1698 aa1.67□□□□□ -2.14
USP53-204ENST00000507906 UHRF1BP1Q6BDS2 1440 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 UGGT2Q9NYU1 1516 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 ITSN1Q15811 1721 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 CUL9Q8IWT3 2517 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 CLDN25C9JDP6 229 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 TMEM238C9JI98 176 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 CIAO1O76071 339 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 NAPSAO96009 420 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 G0S2P27469 103 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 SRIP30626 198 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 HIST1H4AP62805 103 aaKnown RBP1.66□□□□□ -2.14
USP53-204ENST00000507906 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 TMEM155Q4W5P6 130 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 PCOTHQ58A44 107 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 PFN4Q8NHR9 129 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 SLC25A40Q8TBP6 338 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 SLC7A6Q92536 515 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 CEP19Q96LK0 163 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 PHB2Q99623 299 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 NMNAT1Q9HAN9 279 aaPredicted RBP1.66□□□□□ -2.14
USP53-204ENST00000507906 TMEM106BQ9NUM4 274 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 OPTCQ9UBM4 332 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 PYCARDQ9ULZ3 195 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 ANKRD36BQ8N2N9 1353 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 ADGRB2O60241 1585 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 PPLO60437 1756 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 MYH4Q9Y623 1939 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 ECM29Q5VYK3 1845 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 WNK3Q9BYP7 1800 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 ANKRD26Q9UPS8 1709 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 CRYBG1Q9Y4K1 1723 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 ABCA6Q8N139 1617 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 ADCY10Q96PN6 1610 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 PTPRGP23470 1445 aa1.66□□□□□ -2.14
USP53-204ENST00000507906 CACNA1GO43497 2377 aa1.65□□□□□ -2.14
USP53-204ENST00000507906 CPAMD8Q8IZJ3 1885 aa1.65□□□□□ -2.14
USP53-204ENST00000507906 STRCP1A6NGW2 1772 aa1.65□□□□□ -2.14
USP53-204ENST00000507906 PZPP20742 1482 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 NKTRP30414 1462 aaKnown RBP1.65□□□□□ -2.15
USP53-204ENST00000507906 IQSEC2Q5JU85 1478 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 SHANK2Q9UPX8 1470 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 TRBV10-2A0A0K0K1G8 114 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 IRGMA1A4Y4 181 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 OR51F1A6NGY5 319 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 HMSDA8MTL9 139 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 SLC22A1O15245 554 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 ZNF737O75373 536 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 C1QCP02747 245 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 NEFHP12036 1026 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 GNG10P50151 68 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 RELAQ04206 551 aa1.65□□□□□ -2.15
USP53-204ENST00000507906 Q6ZRN7 208 aaPredicted RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms