RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 STAG3L2P0CL84 134 aa13.12□□□□□ -0.31
DDX41-207ENST00000507900 STAG3L3P0CL85 134 aa13.12□□□□□ -0.31
DDX41-207ENST00000507900 PSMB3P49720 205 aa13.12□□□□□ -0.31
DDX41-207ENST00000507900 RHOBP62745 196 aa13.12□□□□□ -0.31
DDX41-207ENST00000507900 NDPQ00604 133 aa13.12□□□□□ -0.31
DDX41-207ENST00000507900 PRSS57Q6UWY2 283 aa13.12□□□□□ -0.31
DDX41-207ENST00000507900 RBMS3Q6XE24 437 aaKnown RBP13.12□□□□□ -0.31
DDX41-207ENST00000507900 C19orf35Q6ZS72 473 aa13.12□□□□□ -0.31
DDX41-207ENST00000507900 C22orf15Q8WYQ4 148 aa13.12□□□□□ -0.31
DDX41-207ENST00000507900 WNT10AQ9GZT5 417 aa13.12□□□□□ -0.31
DDX41-207ENST00000507900 MANBALQ9NQG1 85 aa13.12□□□□□ -0.31
DDX41-207ENST00000507900 VAX2Q9UIW0 290 aa13.12□□□□□ -0.31
DDX41-207ENST00000507900 IGHV3OR16-10A0A075B7F0 116 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 IGHV7-81A0A0B4J1V7 117 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 A0A0U1RQK1 487 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 ZFP92A6NM28 416 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 I3L2K1 104 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 EIF3GO75821 320 aaKnown RBP eCLIP13.11□□□□□ -0.31
DDX41-207ENST00000507900 RND2P52198 227 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 SELENOTP62341 195 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 Q5PR19 223 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 ASPHD1Q5U4P2 390 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 ATRAIDQ6UW56 229 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 BRD3OSQ6XYD6 125 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 RXFP4Q8TDU9 374 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 SLC25A33Q9BSK2 321 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 CR1P17927 2039 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 HMGB3O15347 200 aaKnown RBP13.11□□□□□ -0.31
DDX41-207ENST00000507900 SNAPINO95295 136 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 MT-CO2P00403 227 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 KLF17Q5JT82 389 aaPredicted RBP13.11□□□□□ -0.31
DDX41-207ENST00000507900 SLC35E3Q7Z769 313 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 TTC9CQ8N5M4 171 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 PIFOQ8TCI5 191 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 TRGV9Q99603 122 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 RASL11BQ9BPW5 248 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 FAM103A1Q9BTL3 118 aaKnown RBP13.11□□□□□ -0.31
DDX41-207ENST00000507900 NKX6-2Q9C056 277 aaPredicted RBP13.11□□□□□ -0.31
DDX41-207ENST00000507900 CELSR2Q9HCU4 2923 aa13.11□□□□□ -0.31
DDX41-207ENST00000507900 TENM4Q6N022 2769 aa13.1□□□□□ -0.31
DDX41-207ENST00000507900 PSMB11A5LHX3 300 aa13.1□□□□□ -0.31
DDX41-207ENST00000507900 CXorf1O96002 111 aa13.1□□□□□ -0.31
DDX41-207ENST00000507900 OR5G3P0C626 314 aa13.1□□□□□ -0.31
DDX41-207ENST00000507900 EGR2P11161 476 aaPredicted RBP13.1□□□□□ -0.31
DDX41-207ENST00000507900 KRTAP1-3Q8IUG1 177 aa13.1□□□□□ -0.31
DDX41-207ENST00000507900 RBM14Q96PK6 669 aaKnown RBP13.1□□□□□ -0.31
DDX41-207ENST00000507900 SEPSECSQ9HD40 501 aaKnown RBP13.1□□□□□ -0.31
DDX41-207ENST00000507900 VPS13CQ709C8 3753 aa13.09□□□□□ -0.31
DDX41-207ENST00000507900 PTPN13Q12923 2485 aa13.09□□□□□ -0.31
DDX41-207ENST00000507900 AVPP01185 164 aa13.09□□□□□ -0.31
DDX41-207ENST00000507900 BPIFB3P59826 476 aa13.09□□□□□ -0.31
DDX41-207ENST00000507900 SOHLH1Q5JUK2 328 aa13.09□□□□□ -0.31
DDX41-207ENST00000507900 C5orf56Q8N8D9 126 aa13.09□□□□□ -0.31
DDX41-207ENST00000507900 OR4X1Q8NH49 305 aa13.09□□□□□ -0.31
DDX41-207ENST00000507900 GATAD1Q8WUU5 269 aa13.09□□□□□ -0.31
DDX41-207ENST00000507900 RNF2Q99496 336 aa13.09□□□□□ -0.31
DDX41-207ENST00000507900 TMPRSS5Q9H3S3 457 aa13.09□□□□□ -0.31
DDX41-207ENST00000507900 FUT9Q9Y231 359 aa13.09□□□□□ -0.31
DDX41-207ENST00000507900 IGLV11-55A0A075B6I3 123 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 RNF223E7ERA6 249 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 K7EIM0 57 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 IGHV3-48P01763 117 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 FBP1P09467 338 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 ARL14EPLP0DKL9 152 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 GATA2P23769 480 aaPredicted RBP13.08□□□□□ -0.32
DDX41-207ENST00000507900 MEF2BQ02080 365 aaPredicted RBP13.08□□□□□ -0.32
DDX41-207ENST00000507900 KLK9Q2XQG4 91 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 CYB561D1Q8N8Q1 229 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 NANPQ8TBE9 248 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 HSPB9Q9BQS6 159 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 MRPL32Q9BYC8 188 aaKnown RBP13.08□□□□□ -0.32
DDX41-207ENST00000507900 TNFRSF19Q9NS68 423 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 KLK9Q9UKQ9 250 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 MOB4Q9Y3A3 225 aa13.08□□□□□ -0.32
DDX41-207ENST00000507900 IGHV4-31P0DP07 118 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 ZNF90Q03938 601 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 FAM78BQ5VT40 261 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 SPATA31B1PQ5VZV4 182 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 SPNS3Q6ZMD2 512 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 SGMS2Q8NHU3 365 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 FANCD2OSQ96PS1 177 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 PFDN5Q99471 154 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 DOPEY2Q9Y3R5 2298 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 CD81P60033 236 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 CLRN3Q8NCR9 226 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 OR1L4Q8NGR5 311 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 TMEM37Q8WXS4 190 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 SSX3Q99909 188 aa13.07□□□□□ -0.32
DDX41-207ENST00000507900 CSMD2Q7Z408 3487 aa13.06□□□□□ -0.32
DDX41-207ENST00000507900 IGLC1P0CG04 106 aa13.06□□□□□ -0.32
DDX41-207ENST00000507900 NPBWR1P48145 328 aa13.06□□□□□ -0.32
DDX41-207ENST00000507900 FAM90A2PQ658T7 463 aa13.06□□□□□ -0.32
DDX41-207ENST00000507900 MIR17HGQ75NE6 70 aa13.06□□□□□ -0.32
DDX41-207ENST00000507900 TMEM68Q96MH6 324 aa13.06□□□□□ -0.32
DDX41-207ENST00000507900 ZNF48Q96MX3 618 aaPredicted RBP13.06□□□□□ -0.32
DDX41-207ENST00000507900 TECRQ9NZ01 308 aaKnown RBP13.06□□□□□ -0.32
DDX41-207ENST00000507900 TMEM250H0YL14 139 aa13.05□□□□□ -0.32
DDX41-207ENST00000507900 CLN5O75503 358 aa13.05□□□□□ -0.32
DDX41-207ENST00000507900 TGFAP01135 160 aa13.05□□□□□ -0.32
DDX41-207ENST00000507900 GCHFRP30047 84 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms