RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, human

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF4-209	ENST00000507784	UBAC2	Q8NBM4	344 aa		13.64	□□□□□ -0.23
RNF4-209	ENST00000507784	SCARB1	Q8WTV0	552 aa		13.64	□□□□□ -0.23
RNF4-209	ENST00000507784	ST8SIA2	Q92186	375 aa		13.64	□□□□□ -0.23
RNF4-209	ENST00000507784	NPIPB3	Q92617	1050 aa		13.64	□□□□□ -0.23
RNF4-209	ENST00000507784	WDR61	Q9GZS3	305 aa	Known RBP	13.64	□□□□□ -0.23
RNF4-209	ENST00000507784	TRBV9	A0A0B4J1U6	114 aa		13.63	□□□□□ -0.23
RNF4-209	ENST00000507784	FNDC10	F2Z333	226 aa		13.63	□□□□□ -0.23
RNF4-209	ENST00000507784	MFAP4	P55083	255 aa		13.63	□□□□□ -0.23
RNF4-209	ENST00000507784	CFHR3	Q02985	330 aa		13.63	□□□□□ -0.23
RNF4-209	ENST00000507784	C10orf99	Q6UWK7	81 aa		13.63	□□□□□ -0.23
RNF4-209	ENST00000507784	BTNL8	Q6UX41	500 aa		13.63	□□□□□ -0.23
RNF4-209	ENST00000507784	TREML4	Q6UXN2	200 aa		13.63	□□□□□ -0.23
RNF4-209	ENST00000507784	BAP18	Q8IXM2	172 aa		13.63	□□□□□ -0.23
RNF4-209	ENST00000507784	NECAP1	Q8NC96	275 aa		13.63	□□□□□ -0.23
RNF4-209	ENST00000507784	MRPL36	Q9P0J6	103 aa	Known RBP	13.63	□□□□□ -0.23
RNF4-209	ENST00000507784	MFSD2B	A6NFX1	497 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	IGLV1-40	P01703	118 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	RUNX1	Q01196	453 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	C15orf32	Q32M92	178 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784		Q56UQ5	140 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	TEX38	Q6PEX7	206 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	TEPP	Q6URK8	271 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	LCNL1	Q6ZST4	164 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	TMEM144	Q7Z5S9	345 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	EEF1AKMT3	Q96AZ1	226 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	KLK15	Q9H2R5	256 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	C16orf95	Q9H693	158 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	SLA2	Q9H6Q3	261 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	C21orf62	Q9NYP8	219 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	WDR83OS	Q9Y284	106 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	ZFHX3	Q15911	3703 aa		13.62	□□□□□ -0.23
RNF4-209	ENST00000507784	FN1	P02751	2386 aa	Known RBP	13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	FAM223B	A6NKX1	122 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	ZFP92	A6NM28	416 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	IGHG4	P01861	327 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	RAB9A	P51151	201 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	RAB31	Q13636	194 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	KLK9	Q2XQG4	91 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	FAM223A	Q8IWN6	122 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	ZNF709	Q8N972	641 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	STOML3	Q8TAV4	291 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	VN1R17P	Q8TDU5	208 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	CXorf58	Q96LI9	332 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	GINS3	Q9BRX5	216 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	KLK9	Q9UKQ9	250 aa		13.61	□□□□□ -0.23
RNF4-209	ENST00000507784	TMEM89	A2RUT3	159 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	C17orf112	F2Z3M2	114 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	HAX1	O00165	279 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	GNG7	O60262	68 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	NDUFA7	O95182	113 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	ATP6V0C	P27449	155 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	OR10J1	P30954	320 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	NPBWR1	P48145	328 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	OR4F5	Q8NH21	305 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	RSG1	Q9BU20	258 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	ARV1	Q9H2C2	271 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	SLC25A32	Q9H2D1	315 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	RFNG	Q9Y644	331 aa		13.6	□□□□□ -0.23
RNF4-209	ENST00000507784	MTOR	P42345	2549 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	MPDU1	O75352	247 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	CLN5	O75503	358 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	BRI3	O95415	125 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	CFD	P00746	253 aa	Predicted RBP	13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	IGHV3-11	P01762	117 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	ELANE	P08246	267 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	CAMLG	P49069	296 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	FOXE3	Q13461	319 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	KLHDC1	Q8N7A1	406 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	TMEM116	Q8NCL8	245 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	OR5AU1	Q8NGC0	362 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	OR2G3	Q8NGZ4	309 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	OR4X1	Q8NH49	305 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	LINC01006	Q8NI28	216 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	USMG5	Q96IX5	58 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	MGST2	Q99735	147 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	NPCDR1	Q9BY65	106 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784	SH3BGRL3	Q9H299	93 aa		13.59	□□□□□ -0.23
RNF4-209	ENST00000507784		A0A0G2JLM5	398 aa		13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	AGPAT2	O15120	278 aa		13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	MDK	P21741	143 aa	Predicted RBP	13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	PSMB8	P28062	276 aa		13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	TIGIT	Q495A1	244 aa		13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	EIF5AL1	Q6IS14	154 aa	Known RBP	13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	ALKAL2	Q6UX46	152 aa		13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	CLEC19A	Q6UXS0	136 aa		13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	COMMD1	Q8N668	190 aa		13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	THAP8	Q8NA92	274 aa		13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	ZNF502	Q8TBZ5	544 aa		13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	TMED6	Q8WW62	240 aa		13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	TXN2	Q99757	166 aa		13.58	□□□□□ -0.24
RNF4-209	ENST00000507784	IGKV1OR2-108	A0A075B7D4	117 aa		13.57	□□□□□ -0.24
RNF4-209	ENST00000507784	TRAV30	A0A087WSZ9	112 aa		13.57	□□□□□ -0.24
RNF4-209	ENST00000507784	TRBV7-1	A0A0A6YYK4	115 aa		13.57	□□□□□ -0.24
RNF4-209	ENST00000507784	OR2T8	A6NH00	312 aa		13.57	□□□□□ -0.24
RNF4-209	ENST00000507784	RPLP1	P05386	114 aa	Known RBP	13.57	□□□□□ -0.24
RNF4-209	ENST00000507784	TEX261	Q6UWH6	196 aa		13.57	□□□□□ -0.24
RNF4-209	ENST00000507784	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.57	□□□□□ -0.24
RNF4-209	ENST00000507784	CYP2G1P	Q6ZSU1	146 aa		13.57	□□□□□ -0.24

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