RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 AQP3Q92482 292 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 BORCS7Q96B45 105 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 GINS4Q9BRT9 223 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 SLC22A13Q9Y226 551 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 CYSLTR1Q9Y271 337 aa0.92□□□□□ -2.26
LSM6-205ENST00000507449 BRWD1Q9NSI6 2320 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 TMEM114B3SHH9 223 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 PIRO00625 290 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 OR2T1O43869 369 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 FADS1O60427 444 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 OR5F1O95221 314 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 CTAG1AP78358 180 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 CCL7P80098 99 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 LINC01554Q52M75 96 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 HIST3H2BBQ8N257 126 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 SLC50A1Q9BRV3 221 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 SLC39A9Q9NUM3 307 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 UQCC1Q9NVA1 299 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 COL4A5P29400 1685 aa0.91□□□□□ -2.26
LSM6-205ENST00000507449 FLG2Q5D862 2391 aaPredicted RBP0.9□□□□□ -2.27
LSM6-205ENST00000507449 TRAV14DV4A0A0A6YYC5 116 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 TRAV1-1A0A0B4J248 108 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 A0A0D9SG52 128 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 E2F6O75461 281 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 RBP1P09455 135 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 CTXN2P0C2S0 81 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 COX6A1P12074 109 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 RHEBQ15382 184 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 KHDC3LQ587J8 217 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 TMEM97Q5BJF2 176 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 GDPD1Q8N9F7 314 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 OR4E2Q8NGC2 313 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 OR52L1Q8NGH7 329 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 OR4D11Q8NGI4 311 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 CT55Q8WUE5 264 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 SERPINI1Q99574 410 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 CMSS1Q9BQ75 279 aaKnown RBP0.9□□□□□ -2.27
LSM6-205ENST00000507449 GLTPQ9NZD2 209 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 FBXO5Q9UKT4 447 aa0.9□□□□□ -2.27
LSM6-205ENST00000507449 PIK3C2GO75747 1445 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 CCDC88AQ3V6T2 1871 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 C2orf70A6NJV1 201 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 MIFP14174 115 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 DEFA3P59666 94 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 HIST1H3AP68431 136 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 H3F3AP84243 136 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 DPPA3Q6W0C5 159 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 KRT222Q8N1A0 295 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 ADAT3Q96EY9 351 aaPredicted RBP0.89□□□□□ -2.27
LSM6-205ENST00000507449 TRIM4Q9C037 500 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 CCDC90BQ9GZT6 254 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 TLNRD1Q9H1K6 362 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 RIC1Q4ADV7 1423 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 COL6A6A6NMZ7 2263 aa0.89□□□□□ -2.27
LSM6-205ENST00000507449 hCG_1818297A0A087WSY0 165 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 A8MT66 165 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 PDE6DO43924 150 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 SERPINE1P05121 402 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 S100A6P06703 90 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 SMIM17P0DL12 118 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 SRIP30626 198 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 SSR2P43308 183 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 AP3S2P59780 193 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 PDE6HQ13956 83 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 OR6V1Q8N148 313 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 LINC00311Q8N616 119 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 C12orf29Q8N999 325 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 OR51A2Q8NGJ7 313 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 SLC25A40Q8TBP6 338 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 WFDC5Q8TCV5 224 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 OSTCQ9NRP0 149 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 OR5AC2Q9NZP5 309 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 PCDH15Q96QU1 1955 aa0.88□□□□□ -2.27
LSM6-205ENST00000507449 KIF13BQ9NQT8 1826 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 MYOFQ9NZM1 2061 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 DOCK5Q9H7D0 1870 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 IGKV1-9A0A0C4DH69 117 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 FUOMA2VDF0 154 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 C19orf84I3L1E1 186 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 TCL1BO95988 128 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 C8GP07360 202 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 PLCXD2Q0VAA5 305 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 FADDQ13158 208 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 RNASE10Q5GAN6 216 aaKnown RBP0.87□□□□□ -2.27
LSM6-205ENST00000507449 TEX36Q5VZQ5 186 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 LCA10Q71F78 164 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 OOSP2Q86WS3 158 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 LINC00471Q8N535 108 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 OR13D1Q8NGV5 346 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 ITFG2Q969R8 447 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 MIXL1Q9H2W2 232 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 TRABDQ9H4I3 376 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 TAS2R4Q9NYW5 299 aa0.87□□□□□ -2.27
LSM6-205ENST00000507449 TRAV3A0A0B4J244 114 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 OR1I1O60431 355 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 LYZL6O75951 148 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 OR4E1P0C645 316 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 PPIBP23284 216 aaKnown RBP0.86□□□□□ -2.27
LSM6-205ENST00000507449 CASP1P29466 404 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 SPANXN5Q5MJ07 72 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms