RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 C5orf46Q6UWT4 87 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 HRCT1Q6UXD1 115 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 LYG2Q86SG7 212 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 TAC4Q86UU9 113 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 DHFR2Q86XF0 187 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 ANGPTL5Q86XS5 388 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 STX12Q86Y82 276 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 PDZD9Q8IXQ8 264 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 OR6V1Q8N148 313 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 SLC30A7Q8NEW0 376 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 OR1M1Q8NGA1 313 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 OR52R1Q8NGF1 315 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 OR8J3Q8NGG0 315 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 OR10X1Q8NGY0 326 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 FAM172AQ8WUF8 416 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 DYDC1Q8WWB3 177 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 MAFIPQ8WZ33 124 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 AP3S1Q92572 193 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 CHMP6Q96FZ7 201 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 C14orf144Q96I85 54 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 CEP19Q96LK0 163 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 ERMAPQ96PL5 475 aaPredicted RBP0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 PFDN5Q99471 154 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 GPER1Q99527 375 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 OR51V1Q9H2C8 321 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 OR51I1Q9H343 314 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 CENPHQ9H3R5 247 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 FAM96AQ9H5X1 160 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 WDR54Q9H977 334 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 CACYBPQ9HB71 228 aaKnown RBP0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 NIT2Q9NQR4 276 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 BATF3Q9NR55 127 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 C14orf105Q9NVL8 296 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 PLEKHJ1Q9NW61 149 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 COA4Q9NYJ1 87 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 TVP23BQ9NYZ1 205 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 GSKIPQ9P0R6 139 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 PAIP2BQ9ULR5 123 aaKnown RBP0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 PRELID3BQ9Y3B1 194 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 UFC1Q9Y3C8 167 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 ABCC11Q96J66 1382 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 PCF11O94913 1555 aaKnown RBP0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 N4BP2Q86UW6 1770 aaPredicted RBP0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 MYO5AQ9Y4I1 1855 aaKnown RBP0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 DOCK4Q8N1I0 1966 aa0.39□□□□□ -2.35
CDC42SE2-210ENST00000506929 PTPRGP23470 1445 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 ERBINQ96RT1 1412 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 NCOA3Q9Y6Q9 1424 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 VIRMAQ69YN4 1812 aaKnown RBP0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 SPEF2Q9C093 1822 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 HELZP42694 1942 aaKnown RBP0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 ANAPC1Q9H1A4 1944 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 PLXND1Q9Y4D7 1925 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 CITO14578 2027 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 SCN8AQ9UQD0 1980 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 TRPM7Q96QT4 1865 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 PLB1Q6P1J6 1458 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 ROCK2O75116 1388 aaKnown RBP0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 NUP155O75694 1391 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 PQLC2LA1A4F0 135 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 IRGMA1A4Y4 181 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 ODAMA1E959 279 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 TMEM213A2RRL7 107 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 LRRN3E7EW58 273 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 INMT-MINDY4F8WBC2 141 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 CCDC179H3BU77 68 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 M0R036 132 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 SLC22A1O15245 554 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 CCL25O15444 150 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 DLEU1O43261 78 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 SULT1B1O43704 296 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 PFDN1O60925 122 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 NOS1APO75052 506 aaPredicted RBP0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 OR2B3O76000 313 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 OR2J2O76002 312 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 ATG12O94817 140 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 MPC2O95563 127 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 ZNF682O95780 498 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 MT-ND4LP03901 98 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 HMGN1P05114 100 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 CRHP06850 196 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 SERPINA6P08185 405 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 NBEAP1P0C6P0 100 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 FAM228BP0C875 321 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 CYBAP13498 195 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 S100A1P23297 94 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 RPS3P23396 243 aaKnown RBP eCLIP0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 KDELR1P24390 212 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 SERPINB1P30740 379 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 SDC4P31431 198 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 EIF2B2P49770 351 aaKnown RBP0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 CKS1BP61024 79 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 GNG5P63218 68 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 SUPT4H1P63272 117 aaKnown RBP0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 REEP5Q00765 189 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 HIST1H1AQ02539 215 aaPredicted RBP0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 AKR1C1Q04828 323 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 OR2F1Q13607 317 aa0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 CIRBPQ14011 172 aaKnown RBP0.38□□□□□ -2.35
CDC42SE2-210ENST00000506929 ZNF345Q14585 488 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms