RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 SPARTQ8N0X7 666 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 GBGT1Q8N5D6 347 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 FAM24BQ8N5W8 94 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 TMEM116Q8NCL8 245 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 ZBTB34Q8NCN2 500 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 OR1L8Q8NGR8 309 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 GRAMD2BQ96HH9 432 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 CMTM3Q96MX0 182 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 RHPN1-AS1Q9BWJ2 59 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 VSIRQ9H7M9 311 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 AUNIPQ9H7T9 357 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 TMEM14BQ9NUH8 114 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 COMMD9Q9P000 198 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 TBC1D24Q9ULP9 559 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 OR51B2Q9Y5P1 312 aa4.27□□□□□ -1.73
GYPB-204ENST00000504951 IGLV2-18A0A075B6J9 118 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 IGHV3-66A0A0C4DH42 116 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 NBDYA0A0U1RRE5 68 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 I3L2K1 104 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 NUPL2O15504 423 aaKnown RBP4.26□□□□□ -1.73
GYPB-204ENST00000504951 SCGNO76038 276 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 SPART-AS1P0CW21 52 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 F2RP25116 425 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 TGFBR1P36897 503 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 SERTAD4-AS1Q5TG53 156 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 LEMD1Q68G75 181 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 TPRA1Q86W33 373 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 UBE2DNLQ8IWF7 75 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 STHQ8IWL8 128 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 C15orf53Q8NAA6 179 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 OR5AP2Q8NGF4 316 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 ST8SIA2Q92186 375 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 LSM10Q969L4 123 aaKnown RBP4.26□□□□□ -1.73
GYPB-204ENST00000504951 SLC25A46Q96AG3 418 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 TXN2Q99757 166 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 C1QTNF4Q9BXJ3 329 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 FXYD6Q9H0Q3 95 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 SEPSECSQ9HD40 501 aaKnown RBP4.26□□□□□ -1.73
GYPB-204ENST00000504951 CELA1Q9UNI1 258 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 FAT1Q14517 4588 aa4.26□□□□□ -1.73
GYPB-204ENST00000504951 FLG2Q5D862 2391 aaPredicted RBP4.25□□□□□ -1.73
GYPB-204ENST00000504951 TRAV14DV4A0A0A6YYC5 116 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 LOC100506127A0A0U1RQW1 187 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 A0A1B0GU03 582 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 YIF1AO95070 293 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 MT-CO2P00403 227 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 IGKV1-39P01597 117 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 PMP2P02689 132 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 IGKV1D-39P04432 117 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 HSPA13P48723 471 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 DEFB131AP59861 70 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 GABARAPL2P60520 117 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 HERV-K104P61576 105 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 RELQ04864 619 aaPredicted RBP4.25□□□□□ -1.73
GYPB-204ENST00000504951 IZUMO4Q1ZYL8 232 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 KCTD21Q4G0X4 260 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 PHLDA2Q53GA4 152 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 SPINK9Q5DT21 86 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 DHRS11Q6UWP2 260 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 TOMM20LQ6UXN7 152 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 TCF24Q7RTU0 167 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 SPATA12Q7Z6I5 190 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 LYSMD2Q8IV50 215 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 ZNRF2Q8NHG8 242 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 MOB3AQ96BX8 217 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 C18orf15Q96N68 181 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 ZNF2Q9BSG1 426 aaPredicted RBP4.25□□□□□ -1.73
GYPB-204ENST00000504951 SCRT1Q9BWW7 348 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 NXF2Q9GZY0 626 aaKnown RBP4.25□□□□□ -1.73
GYPB-204ENST00000504951 MS4A6AQ9H2W1 248 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 EHFQ9NZC4 300 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 MRPL36Q9P0J6 103 aaKnown RBP4.25□□□□□ -1.73
GYPB-204ENST00000504951 BLOC1S6Q9UL45 172 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 ANAPC10Q9UM13 185 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 SSR3Q9UNL2 185 aa4.25□□□□□ -1.73
GYPB-204ENST00000504951 A0A0A6YYH2 397 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 A0A1W2PPQ1 181 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 A6NJ64 397 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 ZNF705FA8MVS1 300 aaPredicted RBP4.24□□□□□ -1.73
GYPB-204ENST00000504951 SNAPC5O75971 98 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 ZNF705DP0CH99 300 aaPredicted RBP4.24□□□□□ -1.73
GYPB-204ENST00000504951 ZNF705BP0CI00 300 aaPredicted RBP4.24□□□□□ -1.73
GYPB-204ENST00000504951 NAT1P18440 290 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 C4BPBP20851 252 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 ALDH3B2P48448 385 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 HOXA1P49639 335 aaPredicted RBP4.24□□□□□ -1.73
GYPB-204ENST00000504951 MFAP4P55083 255 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 XGP55808 180 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 SCAND1P57086 179 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 ERVK-16P61578 105 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 ZNF705AQ6ZN79 300 aaPredicted RBP4.24□□□□□ -1.73
GYPB-204ENST00000504951 SYT8Q8NBV8 401 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 OR1P1Q8NH06 330 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 FRZBQ92765 325 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 PINX1Q96BK5 328 aaKnown RBP4.24□□□□□ -1.73
GYPB-204ENST00000504951 SEC22AQ96IW7 307 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 DIABLOQ9NR28 239 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 PRNDQ9UKY0 176 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 RAB26Q9ULW5 256 aa4.24□□□□□ -1.73
GYPB-204ENST00000504951 KNCNA6PVL3 124 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms