RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 KIR2DL1P43626 348 aaPredicted RBP6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 FAM27BQ5VT28 67 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 MOGAT3Q86VF5 341 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 FAM89BQ8N5H3 189 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 OR52E5Q8NH55 327 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 CCL17Q92583 94 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 S100A4P26447 101 aaKnown RBP6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 CCL11P51671 97 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 RHBDD2Q6NTF9 364 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 GTSCR1Q86UQ5 136 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 MDP1Q86V88 176 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 RNASEH2CQ8TDP1 164 aaKnown RBP6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 FER1L6-AS2Q96M78 137 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 TXNDC17Q9BRA2 123 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 IGKV1-6A0A0C4DH72 117 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 IGHV1-69-2A0A0G2JMI3 117 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 SMIM13P0DJ93 91 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 DSCR4P56555 118 aaPredicted RBP6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 ZNF414Q96IQ9 312 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 CITED1Q99966 193 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 MRPL16Q9NX20 251 aaKnown RBP6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 PILRBQ9UKJ0 227 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 OR51B2Q9Y5P1 312 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 IGHV3-66A0A0C4DH42 116 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 KLK10O43240 276 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 IGKV3-11P04433 115 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 OR9G9P0C7N8 305 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 EFNB3Q15768 340 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 ADAMTSL5Q6ZMM2 481 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 AGBL5Q8NDL9 886 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 ARPC1AQ92747 370 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 TMEM56-RWDD3S4R434 201 aa6.5□□□□□ -1.37
ATP2C1-208ENST00000504948 TEX48A0A1B0GUV7 120 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 CELA3BP08861 270 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 RAC1P63000 192 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 CCL8P80075 99 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 SAMD5Q5TGI4 173 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 UBALD2Q8IYN6 164 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 BCL6BQ8N143 479 aaPredicted RBP6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 ZCCHC24Q8N2G6 241 aaKnown RBP6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 MBD3L1Q8WWY6 194 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 JMJD8Q96S16 334 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 SPTBN4Q9H254 2564 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 CEP192Q8TEP8 1941 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 LMO7DNF2Z398 122 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 IGHV3-23P01764 117 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 CDKN1BP46527 198 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 ATP5G2Q06055 141 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 PCOLCEQ15113 449 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 CSTL1Q9H114 145 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 ZNF257Q9Y2Q1 563 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 TRBV20OR9-2A0A075B6H5 130 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 KIR2DL5BA0A0G2JN68 375 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 KIR2DL5BA0A0G2JPC4 375 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 CEACAM18A8MTB9 384 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 RAC3P60763 192 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 IL15RAQ13261 267 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 TBR1Q16650 682 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 ZNF658BQ4V348 819 aaPredicted RBP6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 TTC32Q5I0X7 151 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 KIR2DL5AQ8N109 375 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 FOXC2Q99958 501 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 TM2D1Q9BX74 207 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 LRP4O75096 1905 aa6.49□□□□□ -1.37
ATP2C1-208ENST00000504948 TRBV20-1A0A075B6N2 111 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 ZNF716A6NP11 495 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 H3BMG7 143 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 MGPP08493 103 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 ESDP10768 282 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 CSRP1P21291 193 aaKnown RBP6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 HBBP68871 147 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 PAX2Q02962 417 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 SSC4DQ8WTU2 575 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 SNRNP40Q96DI7 357 aaKnown RBP6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 C1QTNF5Q9BXJ0 243 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 TMEM242Q9NWH2 141 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 FRYLO94915 3013 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 TRAV26-1A0A087WT03 109 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 NDUFB8O95169 186 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 NTF4P34130 210 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 FBXW9Q5XUX1 488 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 INO80CQ6PI98 192 aaPredicted RBP6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 LRTM2Q8N967 370 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 COL25A1Q9BXS0 654 aaPredicted RBP6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 ZNF576Q9H609 170 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 DYNLRB1Q9NP97 96 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 IGHV3-64A0A075B6Q5 118 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 TRAV24A0A0B4J272 114 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 J3QT63 122 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 DNPH1O43598 174 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 IGHV4-34P06331 123 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 LYL1P12980 280 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 DCAF12Q5T6F0 453 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 CIARTQ8N365 385 aaPredicted RBP6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 C18orf32Q8TCD1 76 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 MRPL13Q9BYD1 178 aaKnown RBP6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 IGKV3D-15A0A087WSY6 115 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 B5MCH6 92 aa6.48□□□□□ -1.37
ATP2C1-208ENST00000504948 IGKV3-15P01624 115 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms