RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 OR2T8A6NH00 312 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 H0YJW9 148 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 SRP19P09132 144 aaKnown RBP11.53□□□□□ -0.56
TCOF1-207ENST00000504761 Q8NA96 180 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 CACNG8Q8WXS5 425 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 TMEM50AO95807 157 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 SMIM17P0DL12 118 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 HIST1H1EP10412 219 aaKnown RBP11.53□□□□□ -0.56
TCOF1-207ENST00000504761 ZNF134P52741 427 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 RELBQ01201 579 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 CD69Q07108 199 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 TREML4Q6UXN2 200 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 SSC4DQ8WTU2 575 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 DUX5Q96PT3 197 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 WDR83OSQ9Y284 106 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 AP4M1O00189 453 aa11.52□□□□□ -0.56
TCOF1-207ENST00000504761 ICAM4Q14773 271 aa11.52□□□□□ -0.56
TCOF1-207ENST00000504761 TRAV30A0A087WSZ9 112 aa11.52□□□□□ -0.56
TCOF1-207ENST00000504761 SCO2A0A1W2PP80 73 aa11.52□□□□□ -0.56
TCOF1-207ENST00000504761 SOD3P08294 240 aa11.52□□□□□ -0.57
TCOF1-207ENST00000504761 CD81P60033 236 aa11.52□□□□□ -0.57
TCOF1-207ENST00000504761 FA2HQ7L5A8 372 aa11.52□□□□□ -0.57
TCOF1-207ENST00000504761 GBGT1Q8N5D6 347 aa11.52□□□□□ -0.57
TCOF1-207ENST00000504761 CLDND2Q8NHS1 167 aa11.52□□□□□ -0.57
TCOF1-207ENST00000504761 DYNLRB2Q8TF09 96 aa11.52□□□□□ -0.57
TCOF1-207ENST00000504761 BET1LQ9NYM9 111 aa11.52□□□□□ -0.57
TCOF1-207ENST00000504761 TNCP24821 2201 aa11.52□□□□□ -0.57
TCOF1-207ENST00000504761 PRSS3P2Q8NHM4 247 aa11.52□□□□□ -0.57
TCOF1-207ENST00000504761 GSX1Q9H4S2 264 aaPredicted RBP11.52□□□□□ -0.57
TCOF1-207ENST00000504761 USP9XQ93008 2570 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-207ENST00000504761 NPPCP23582 126 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 AMTP48728 403 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 DEFA6Q01524 100 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 PRSS8Q16651 343 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 TEX45Q8NA69 505 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 RNASEH2CQ8TDP1 164 aaKnown RBP11.51□□□□□ -0.57
TCOF1-207ENST00000504761 TXN2Q99757 166 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 TXNDC17Q9BRA2 123 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 BUB1B-PAK6H3BSN5 160 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 FGF16O43320 207 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 IGKV1-39P01597 117 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 IGKV1D-39P04432 117 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 PYYP10082 97 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 SELENOKQ9Y6D0 94 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 RPL7P18124 248 aaKnown RBP11.51□□□□□ -0.57
TCOF1-207ENST00000504761 LOXP28300 417 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-207ENST00000504761 C17orf58Q2M2W7 97 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 CENPWQ5EE01 88 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 RPP25LQ8N5L8 163 aaKnown RBP11.51□□□□□ -0.57
TCOF1-207ENST00000504761 TNFRSF14Q92956 283 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 EEF1AKMT3Q96AZ1 226 aa11.51□□□□□ -0.57
TCOF1-207ENST00000504761 SETD2Q9BYW2 2564 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-207ENST00000504761 MSMPQ1L6U9 139 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 ZNF738Q8NE65 137 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 OR52E5Q8NH55 327 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 FOXI3A8MTJ6 420 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-207ENST00000504761 TMEM250H0YL14 139 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 CCKARP32238 428 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 TPTE2P1Q5T6R2 138 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 TMEM14EPQ6UXP3 125 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 C19orf24Q9BVV8 132 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 PGPEP1LA6NFU8 196 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 SHISA9B4DS77 424 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 AGAP20933 346 aa11.5□□□□□ -0.57
TCOF1-207ENST00000504761 CFHR2P36980 270 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 DIAPH2-AS1Q14236 149 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 C3orf36Q3SXR2 165 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 TMEM155Q4W5P6 130 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 TMEM78Q5T7P6 136 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 Q8TCH9 128 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 MRPL32Q9BYC8 188 aaKnown RBP11.49□□□□□ -0.57
TCOF1-207ENST00000504761 TRAV5A0A0B4J249 113 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 IGKV3-20P01619 116 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 KRTAP27-1Q3LI81 207 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 KIAA1644Q3SXP7 199 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 WDR73Q6P4I2 378 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 OR4B1Q8NGF8 309 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 GGTLC1Q9BX51 225 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 C15orf65H3BRN8 121 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 SLC17A3O00476 420 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 AREGP15514 252 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 EFNB3Q15768 340 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 TM4SF20Q53R12 229 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 TMEM177Q53S58 311 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 TOMM20LQ6UXN7 152 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 TRIOO75962 3097 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 LRRK2Q5S007 2527 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 C15orf62A8K5M9 175 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 PAFAH1B2P68402 229 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 RHOGP84095 191 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 SRSF4Q08170 494 aaKnown RBP11.49□□□□□ -0.57
TCOF1-207ENST00000504761 SP5Q6BEB4 398 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-207ENST00000504761 C11orf44Q8N8P7 122 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 Q8NFD4 153 aa11.49□□□□□ -0.57
TCOF1-207ENST00000504761 EPG5Q9HCE0 2579 aa11.48□□□□□ -0.57
TCOF1-207ENST00000504761 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-207ENST00000504761 FAM106AQ4KMX7 169 aa11.48□□□□□ -0.57
TCOF1-207ENST00000504761 SPATA31B1PQ5VZV4 182 aa11.48□□□□□ -0.57
TCOF1-207ENST00000504761 ARL2-SNX15V9GYD0 113 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms