RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 IGHV3-49A0A0A0MS15 119 aa13.43□□□□□ -0.26
SH3TC1-208ENST00000504223 C15orf62A8K5M9 175 aa13.43□□□□□ -0.26
SH3TC1-208ENST00000504223 GNG7O60262 68 aa13.43□□□□□ -0.26
SH3TC1-208ENST00000504223 BAK1Q16611 211 aa13.43□□□□□ -0.26
SH3TC1-208ENST00000504223 SCGB3A2Q96PL1 93 aa13.43□□□□□ -0.26
SH3TC1-208ENST00000504223 GAR1Q9NY12 217 aaKnown RBP13.43□□□□□ -0.26
SH3TC1-208ENST00000504223 SMPXQ9UHP9 88 aa13.43□□□□□ -0.26
SH3TC1-208ENST00000504223 IGHV7-4-1A0A0J9YVY3 117 aa13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 TSPAN4O14817 238 aa13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 TMEM50AO95807 157 aa13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 LYL1P12980 280 aa13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 FAUP35544 74 aaKnown RBP13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 RELQ04864 619 aaPredicted RBP13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 ANKRD55Q3KP44 614 aa13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 TOMM20LQ6UXN7 152 aa13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 RBPMS2Q6ZRY4 209 aaKnown RBP13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 TMED4Q7Z7H5 227 aa13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 ZFAND3Q9H8U3 227 aa13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 ENY2Q9NPA8 101 aa13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 KCNIP3Q9Y2W7 256 aa13.42□□□□□ -0.26
SH3TC1-208ENST00000504223 IGHV3OR16-13A0A075B7E8 117 aa13.41□□□□□ -0.26
SH3TC1-208ENST00000504223 IGHV3-74A0A0B4J1X5 117 aa13.41□□□□□ -0.26
SH3TC1-208ENST00000504223 A0A0B4J2A0 478 aa13.41□□□□□ -0.26
SH3TC1-208ENST00000504223 A0A1B0GU03 582 aa13.41□□□□□ -0.26
SH3TC1-208ENST00000504223 CHEK1O14757 476 aa13.41□□□□□ -0.26
SH3TC1-208ENST00000504223 SULT1A3P0DMM9 295 aa13.41□□□□□ -0.26
SH3TC1-208ENST00000504223 SULT1A4P0DMN0 295 aa13.41□□□□□ -0.26
SH3TC1-208ENST00000504223 AP3S2P59780 193 aa13.41□□□□□ -0.26
SH3TC1-208ENST00000504223 DUSP18Q8NEJ0 188 aa13.41□□□□□ -0.26
SH3TC1-208ENST00000504223 RNF2Q99496 336 aa13.41□□□□□ -0.26
SH3TC1-208ENST00000504223 SHPKQ9UHJ6 478 aa13.41□□□□□ -0.26
SH3TC1-208ENST00000504223 CEBPZOSA8MTT3 80 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 YIF1AO95070 293 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 APOHP02749 345 aaPredicted RBP13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 OPRK1P41145 380 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 NPBWR1P48145 328 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 SUB1P53999 127 aaKnown RBP eCLIP13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 ODF3L2Q3SX64 289 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 C2orf83Q53S99 150 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 SPANXN2Q5MJ10 180 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 LILRB2Q8N423 598 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 SPAG8Q99932 426 aaPredicted RBP13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 FAM110AQ9BQ89 295 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 RHPN1-AS1Q9BWJ2 59 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 HEYLQ9NQ87 328 aaPredicted RBP13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 UBQLN2Q9UHD9 624 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 RYR2Q92736 4967 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 TENM2Q9NT68 2774 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 SACSQ9NZJ4 4579 aa13.4□□□□□ -0.26
SH3TC1-208ENST00000504223 CORTO00230 105 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 CLN5O75503 358 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 IGKV1-17P01599 117 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 HTR2BP41595 481 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 CCR6P51684 374 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 TNFRSF9Q07011 255 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 TMEM128Q5BJH2 165 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 LGI3Q8N145 548 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 TMEM116Q8NCL8 245 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 SLC24A4Q8NFF2 622 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 OR4X1Q8NH49 305 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 HSPB7Q9UBY9 170 aa13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 PUS1Q9Y606 427 aaKnown RBP eCLIP13.39□□□□□ -0.27
SH3TC1-208ENST00000504223 PPP1R1AQ13522 171 aa13.38□□□□□ -0.27
SH3TC1-208ENST00000504223 SMCO1Q147U7 214 aa13.38□□□□□ -0.27
SH3TC1-208ENST00000504223 FAM90A2PQ658T7 463 aa13.38□□□□□ -0.27
SH3TC1-208ENST00000504223 PRSS54Q6PEW0 395 aa13.38□□□□□ -0.27
SH3TC1-208ENST00000504223 ZNF600Q6ZNG1 722 aa13.38□□□□□ -0.27
SH3TC1-208ENST00000504223 DEDD2Q8WXF8 326 aa13.38□□□□□ -0.27
SH3TC1-208ENST00000504223 ST8SIA2Q92186 375 aa13.38□□□□□ -0.27
SH3TC1-208ENST00000504223 SLC25A21Q9BQT8 299 aaPredicted RBP13.38□□□□□ -0.27
SH3TC1-208ENST00000504223 GGTLC1Q9BX51 225 aa13.38□□□□□ -0.27
SH3TC1-208ENST00000504223 RBKSQ9H477 322 aa13.38□□□□□ -0.27
SH3TC1-208ENST00000504223 TRAV14DV4A0A0A6YYC5 116 aa13.37□□□□□ -0.27
SH3TC1-208ENST00000504223 PITX3O75364 302 aa13.37□□□□□ -0.27
SH3TC1-208ENST00000504223 TIGITQ495A1 244 aa13.37□□□□□ -0.27
SH3TC1-208ENST00000504223 ZFAND6Q6FIF0 208 aa13.37□□□□□ -0.27
SH3TC1-208ENST00000504223 LAMTOR1Q6IAA8 161 aa13.37□□□□□ -0.27
SH3TC1-208ENST00000504223 VSIRQ9H7M9 311 aa13.37□□□□□ -0.27
SH3TC1-208ENST00000504223 LOC102724200A0A096LPH7 203 aaPredicted RBP13.36□□□□□ -0.27
SH3TC1-208ENST00000504223 IGHV3-66A0A0C4DH42 116 aa13.36□□□□□ -0.27
SH3TC1-208ENST00000504223 SFT2D2O95562 160 aa13.36□□□□□ -0.27
SH3TC1-208ENST00000504223 ANXA3P12429 323 aa13.36□□□□□ -0.27
SH3TC1-208ENST00000504223 VAMP1P23763 118 aa13.36□□□□□ -0.27
SH3TC1-208ENST00000504223 NPY1RP25929 384 aa13.36□□□□□ -0.27
SH3TC1-208ENST00000504223 BTCP35070 178 aa13.36□□□□□ -0.27
SH3TC1-208ENST00000504223 RND2P52198 227 aa13.36□□□□□ -0.27
SH3TC1-208ENST00000504223 SRPXP78539 464 aa13.36□□□□□ -0.27
SH3TC1-208ENST00000504223 LRTM2Q8N967 370 aa13.36□□□□□ -0.27
SH3TC1-208ENST00000504223 LINC00854A0A1B0GVQ3 168 aa13.35□□□□□ -0.27
SH3TC1-208ENST00000504223 IGLC1P0CG04 106 aa13.35□□□□□ -0.27
SH3TC1-208ENST00000504223 ZNF124Q15973 351 aa13.35□□□□□ -0.27
SH3TC1-208ENST00000504223 RNASEH2CQ8TDP1 164 aaKnown RBP13.35□□□□□ -0.27
SH3TC1-208ENST00000504223 DTD1Q8TEA8 209 aa13.35□□□□□ -0.27
SH3TC1-208ENST00000504223 FLVCR2Q9UPI3 526 aa13.35□□□□□ -0.27
SH3TC1-208ENST00000504223 IGKV3-7A0A075B6H7 116 aa13.34□□□□□ -0.27
SH3TC1-208ENST00000504223 DUXBA0A1W2PPF3 345 aa13.34□□□□□ -0.27
SH3TC1-208ENST00000504223 OR4C46A6NHA9 309 aa13.34□□□□□ -0.27
SH3TC1-208ENST00000504223 TFPI2P48307 235 aa13.34□□□□□ -0.27
SH3TC1-208ENST00000504223 RBMS2Q15434 407 aaKnown RBP13.34□□□□□ -0.27
SH3TC1-208ENST00000504223 TRIQKQ629K1 86 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms