RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 FNDC4Q9H6D8 234 aaPredicted RBP8.53□□□□□ -1.04
VCAN-205ENST00000503923 ZC4H2Q9NQZ6 224 aa8.53□□□□□ -1.04
VCAN-205ENST00000503923 C15orf62A8K5M9 175 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 SEC14L6B5MCN3 397 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 G3V4G9 280 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 NUPL2O15504 423 aaKnown RBP8.52□□□□□ -1.05
VCAN-205ENST00000503923 SSSCA1O60232 199 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 GNG7O60262 68 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 SCGB2A1O75556 95 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 OR2C1O95371 312 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 IGHV3-48P01763 117 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 MBPP02686 304 aaPredicted RBP8.52□□□□□ -1.05
VCAN-205ENST00000503923 IFNA4P05014 189 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 SLC25A4P12235 298 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 FAM106AQ4KMX7 169 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 OXLD1Q5BKU9 147 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 OR9G4Q8NGQ1 327 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 SMIM8Q96KF7 97 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 RAB40CQ96S21 281 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 ELOVL1Q9BW60 279 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 PSENENQ9NZ42 101 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 PEMTQ9UBM1 199 aa8.52□□□□□ -1.05
VCAN-205ENST00000503923 PAIP2BQ9ULR5 123 aaKnown RBP8.52□□□□□ -1.05
VCAN-205ENST00000503923 STRAPQ9Y3F4 350 aaKnown RBP8.52□□□□□ -1.05
VCAN-205ENST00000503923 LGALS9O00182 355 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 CLN5O75503 358 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 CTSGP08311 255 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 INSL3P51460 131 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 TAS2R30P59541 319 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 RELQ04864 619 aaPredicted RBP8.51□□□□□ -1.05
VCAN-205ENST00000503923 CD69Q07108 199 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 OXA1LQ15070 435 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 MLANAQ16655 118 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 SPANXN5Q5MJ07 72 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 REC114Q7Z4M0 266 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 OR4X1Q8NH49 305 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 OR4C12Q96R67 309 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 CHRDL1Q9BU40 450 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 ZNF436Q9C0F3 470 aaPredicted RBP8.51□□□□□ -1.05
VCAN-205ENST00000503923 RCL1Q9Y2P8 373 aaKnown RBP8.51□□□□□ -1.05
VCAN-205ENST00000503923 LSM5Q9Y4Y9 91 aaKnown RBP8.51□□□□□ -1.05
VCAN-205ENST00000503923 ALG5Q9Y673 324 aa8.51□□□□□ -1.05
VCAN-205ENST00000503923 TRAV30A0A087WSZ9 112 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 ZNF320A2RRD8 509 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 H3BP45 60 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 K7EPK0 472 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 L7N2F9 121 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 WIPF1O43516 503 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 TSC22D2O75157 780 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 SAP30O75446 220 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 SIX6O95475 246 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 TMEM50AO95807 157 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 ADMP35318 185 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 GPX4P36969 197 aaPredicted RBP8.5□□□□□ -1.05
VCAN-205ENST00000503923 VAMP2P63027 116 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 CYCSP99999 105 aaKnown RBP8.5□□□□□ -1.05
VCAN-205ENST00000503923 IL15RAQ13261 267 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 PRSS54Q6PEW0 395 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 SLC16A13Q7RTY0 426 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 TMEM116Q8NCL8 245 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 CACNG8Q8WXS5 425 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 NMES1Q9C002 83 aa8.5□□□□□ -1.05
VCAN-205ENST00000503923 MRPL36Q9P0J6 103 aaKnown RBP8.5□□□□□ -1.05
VCAN-205ENST00000503923 NBEAL1Q6ZS30 2694 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 IGHV3-35A0A0C4DH35 117 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 A8MWP6 167 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 NDUFA4O00483 81 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 PVALBP20472 110 aaPredicted RBP8.49□□□□□ -1.05
VCAN-205ENST00000503923 RND2P52198 227 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 PAX9P55771 341 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 S100A10P60903 97 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 RAB32Q13637 225 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 BEAN1Q3B7T3 259 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 SLC35E1Q96K37 410 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 SIGLEC8Q9NYZ4 499 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 MGAT4CQ9UBM8 478 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 ZMAT5Q9UDW3 170 aaKnown RBP8.49□□□□□ -1.05
VCAN-205ENST00000503923 UFC1Q9Y3C8 167 aa8.49□□□□□ -1.05
VCAN-205ENST00000503923 CSN3P07498 182 aa8.48□□□□□ -1.05
VCAN-205ENST00000503923 ELLP55199 621 aaPredicted RBP8.48□□□□□ -1.05
VCAN-205ENST00000503923 H2BFSP57053 126 aa8.48□□□□□ -1.05
VCAN-205ENST00000503923 KPRPQ5T749 579 aaPredicted RBP8.48□□□□□ -1.05
VCAN-205ENST00000503923 TMEM14EPQ6UXP3 125 aa8.48□□□□□ -1.05
VCAN-205ENST00000503923 UNQ9165/PRO28630Q6UXU0 137 aa8.48□□□□□ -1.05
VCAN-205ENST00000503923 IL34Q6ZMJ4 242 aa8.48□□□□□ -1.05
VCAN-205ENST00000503923 ZNF600Q6ZNG1 722 aa8.48□□□□□ -1.05
VCAN-205ENST00000503923 OR1S2Q8NGQ3 325 aa8.48□□□□□ -1.05
VCAN-205ENST00000503923 TMEM190Q8WZ59 177 aa8.48□□□□□ -1.05
VCAN-205ENST00000503923 NPIPB3Q92617 1050 aa8.48□□□□□ -1.05
VCAN-205ENST00000503923 ACY3Q96HD9 319 aa8.48□□□□□ -1.05
VCAN-205ENST00000503923 MED28Q9H204 178 aa8.48□□□□□ -1.05
VCAN-205ENST00000503923 NOTCH1P46531 2555 aa8.47□□□□□ -1.05
VCAN-205ENST00000503923 C2orf70A6NJV1 201 aa8.47□□□□□ -1.05
VCAN-205ENST00000503923 PMS2P5A8MQ11 134 aa8.47□□□□□ -1.05
VCAN-205ENST00000503923 PRSS46E5RG02 174 aa8.47□□□□□ -1.05
VCAN-205ENST00000503923 YIF1AO95070 293 aa8.47□□□□□ -1.05
VCAN-205ENST00000503923 RLN2P04090 185 aa8.47□□□□□ -1.05
VCAN-205ENST00000503923 IGLC1P0CG04 106 aa8.47□□□□□ -1.05
VCAN-205ENST00000503923 OR10J1P30954 320 aa8.47□□□□□ -1.05
VCAN-205ENST00000503923 BCAP31P51572 246 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms