RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 MPDU1O75352 247 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 DUSP14O95147 198 aaKnown RBP5.37□□□□□ -1.55
CLCN3-203ENST00000502998 NDUFC2O95298 119 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 IGLV3-19P01714 112 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 CD59P13987 128 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 LEPP41159 167 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 NMUP48645 174 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 TMEM258P61165 79 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 GUSBP1Q15486 140 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 CLEC12BQ2HXU8 276 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 SPRNQ5BIV9 151 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 NMSQ5H8A3 153 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 PSMG4Q5JS54 123 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 Q5XG85 94 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 FAM231DQ6ZW35 169 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 RNF144BQ7Z419 303 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 CXorf67Q86X51 503 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-203ENST00000502998 ZNF584Q8IVC4 421 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 ZNF114Q8NC26 417 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 GJC3Q8NFK1 279 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 WFDC5Q8TCV5 224 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 CLEC4CQ8WTT0 213 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 SSC4DQ8WTU2 575 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 APOBEC4Q8WW27 367 aaKnown RBP5.37□□□□□ -1.55
CLCN3-203ENST00000502998 ADAT3Q96EY9 351 aaPredicted RBP5.37□□□□□ -1.55
CLCN3-203ENST00000502998 PGLYRP3Q96LB9 341 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 C9orf85Q96MD7 179 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 GNB1LQ9BYB4 327 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 TMEM222Q9H0R3 208 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 C21orf62Q9NYP8 219 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 GNG12Q9UBI6 72 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 PRO0461Q9UI25 63 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 ZNF835Q9Y2P0 537 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 KLF12Q9Y4X4 402 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 RNF114Q9Y508 228 aa5.37□□□□□ -1.55
CLCN3-203ENST00000502998 ANKRD36A6QL64 1941 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 CKAP5Q14008 2032 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 TEX15Q9BXT5 2789 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 TRBV20-1A0A075B6N2 111 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 CEACAM18A8MTB9 384 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-203ENST00000502998 E9PLD3 99 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 C11orf98E9PRG8 122 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 M0R2P5 195 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 SDCBPO00560 298 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-203ENST00000502998 LDB3O75112 727 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 IGLV3-27P01718 113 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 IGHG1P01857 330 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 IGHMP01871 453 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 PRNPP04156 253 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 PRB1P04280 392 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 CD40P25942 277 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 CD70P32970 193 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 EFNB2P52799 333 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 RPS14P62263 151 aaKnown RBP5.36□□□□□ -1.55
CLCN3-203ENST00000502998 RPS4XP62701 263 aaKnown RBP5.36□□□□□ -1.55
CLCN3-203ENST00000502998 ZNF90Q03938 601 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 LTBQ06643 244 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 KLF17Q5JT82 389 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-203ENST00000502998 FAM27D1Q5T7N8 215 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 CD164L2Q6UWJ8 174 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 Q6ZSR3 168 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 C2orf91Q6ZV80 131 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 BCDIN3DQ7Z5W3 292 aaKnown RBP5.36□□□□□ -1.55
CLCN3-203ENST00000502998 TBC1D26Q86UD7 250 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 C1orf158Q8N1D5 194 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 GAPTQ8N292 157 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 ZNF501Q96CX3 271 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-203ENST00000502998 TIMD4Q96H15 378 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 PSMG3-AS1Q96PY0 264 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 PELI2Q9HAT8 420 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 RETNQ9HD89 108 aa5.36□□□□□ -1.55
CLCN3-203ENST00000502998 SIRT4Q9Y6E7 314 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-203ENST00000502998 CHCHD2Q9Y6H1 151 aaPredicted RBP5.36□□□□□ -1.55
CLCN3-203ENST00000502998 TLN1Q9Y490 2541 aaKnown RBP5.36□□□□□ -1.55
CLCN3-203ENST00000502998 FAM90A10PA6NDY2 464 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 OVOL1O14753 267 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 LGALS1P09382 135 aaKnown RBP5.35□□□□□ -1.55
CLCN3-203ENST00000502998 CECR9P0C854 216 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 ACRV1P26436 265 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 PTGDSP41222 190 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 RPL34P49207 117 aaKnown RBP5.35□□□□□ -1.55
CLCN3-203ENST00000502998 SSR4P51571 173 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 TAS2R45P59539 299 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 PLGLB1Q02325 96 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 ZNF117Q03924 483 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 CDK5R1Q15078 307 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 TRIP6Q15654 476 aaKnown RBP5.35□□□□□ -1.55
CLCN3-203ENST00000502998 ZNF141Q15928 474 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 RRN3P1Q2M238 152 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 CEACAM16Q2WEN9 425 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 ANXA2RQ3ZCQ2 193 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 LCN12Q6JVE5 192 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 SH2D6Q7Z4S9 175 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 PRIMA1Q86XR5 153 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 LMX1AQ8TE12 382 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 GATAD1Q8WUU5 269 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 OR2A5Q96R48 311 aa5.35□□□□□ -1.55
CLCN3-203ENST00000502998 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms