RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 PRCDQ00LT1 54 aa12.76□□□□□ -0.37
HERC6-204ENST00000502870 OGFRL1Q5TC84 451 aaPredicted RBP12.76□□□□□ -0.37
HERC6-204ENST00000502870 HOGA1Q86XE5 327 aa12.76□□□□□ -0.37
HERC6-204ENST00000502870 OR4A16Q8NH70 328 aa12.76□□□□□ -0.37
HERC6-204ENST00000502870 SRRM2Q9UQ35 2752 aaKnown RBP12.75□□□□□ -0.37
HERC6-204ENST00000502870 IGHV3OR16-12A0A075B7B8 117 aa12.75□□□□□ -0.37
HERC6-204ENST00000502870 H3BMM0 161 aa12.75□□□□□ -0.37
HERC6-204ENST00000502870 RGS10O43665 173 aa12.75□□□□□ -0.37
HERC6-204ENST00000502870 GNRHRP30968 328 aa12.75□□□□□ -0.37
HERC6-204ENST00000502870 HOXA1P49639 335 aaPredicted RBP12.75□□□□□ -0.37
HERC6-204ENST00000502870 GSG1LQ6UXU4 331 aa12.75□□□□□ -0.37
HERC6-204ENST00000502870 CMTM1Q8IZ96 169 aa12.75□□□□□ -0.37
HERC6-204ENST00000502870 TMEM230Q96A57 120 aa12.75□□□□□ -0.37
HERC6-204ENST00000502870 SEPSECSQ9HD40 501 aaKnown RBP12.75□□□□□ -0.37
HERC6-204ENST00000502870 DNAH5Q8TE73 4624 aa12.74□□□□□ -0.37
HERC6-204ENST00000502870 DBX1A6NMT0 343 aa12.74□□□□□ -0.37
HERC6-204ENST00000502870 CORTO00230 105 aa12.74□□□□□ -0.37
HERC6-204ENST00000502870 PGLYRP1O75594 196 aaPredicted RBP12.74□□□□□ -0.37
HERC6-204ENST00000502870 SNCAP37840 140 aa12.74□□□□□ -0.37
HERC6-204ENST00000502870 HLA-DRB4P13762 266 aa12.73□□□□□ -0.37
HERC6-204ENST00000502870 DAD1P61803 113 aa12.73□□□□□ -0.37
HERC6-204ENST00000502870 OR5AP2Q8NGF4 316 aa12.73□□□□□ -0.37
HERC6-204ENST00000502870 ZNRF2Q8NHG8 242 aa12.73□□□□□ -0.37
HERC6-204ENST00000502870 HLA-DRB4X5D2U9 266 aa12.73□□□□□ -0.37
HERC6-204ENST00000502870 NOTOA8MTQ0 251 aa12.72□□□□□ -0.37
HERC6-204ENST00000502870 PPP5CP53041 499 aa12.72□□□□□ -0.37
HERC6-204ENST00000502870 HSPE1P61604 102 aaKnown RBP12.72□□□□□ -0.37
HERC6-204ENST00000502870 H2BFWTQ7Z2G1 175 aa12.72□□□□□ -0.37
HERC6-204ENST00000502870 VCXQ9H320 206 aa12.72□□□□□ -0.37
HERC6-204ENST00000502870 TRDV1A0A1B0GX56 115 aa12.71□□□□□ -0.37
HERC6-204ENST00000502870 FAM90A26D6RGX4 464 aa12.71□□□□□ -0.37
HERC6-204ENST00000502870 CLN5O75503 358 aa12.71□□□□□ -0.37
HERC6-204ENST00000502870 HBE1P02100 147 aa12.71□□□□□ -0.37
HERC6-204ENST00000502870 CBX5P45973 191 aa12.71□□□□□ -0.37
HERC6-204ENST00000502870 ALDH3B2P48448 385 aa12.71□□□□□ -0.37
HERC6-204ENST00000502870 SUB1P53999 127 aaKnown RBP eCLIP12.71□□□□□ -0.37
HERC6-204ENST00000502870 CCL18P55774 89 aa12.71□□□□□ -0.37
HERC6-204ENST00000502870 LGALS14Q8TCE9 139 aa12.71□□□□□ -0.37
HERC6-204ENST00000502870 DUSP21Q9H596 190 aa12.71□□□□□ -0.37
HERC6-204ENST00000502870 FAM212BQ9NTI7 297 aaPredicted RBP12.71□□□□□ -0.37
HERC6-204ENST00000502870 RHBDL2Q9NX52 303 aa12.71□□□□□ -0.37
HERC6-204ENST00000502870 GOLT1BQ9Y3E0 138 aa12.71□□□□□ -0.37
HERC6-204ENST00000502870 YTHDF2Q9Y5A9 579 aaKnown RBP12.71□□□□□ -0.37
HERC6-204ENST00000502870 S100GP29377 79 aa12.7□□□□□ -0.38
HERC6-204ENST00000502870 NRN1Q9NPD7 142 aa12.7□□□□□ -0.38
HERC6-204ENST00000502870 NDUFB11Q9NX14 153 aa12.7□□□□□ -0.38
HERC6-204ENST00000502870 EHFQ9NZC4 300 aa12.7□□□□□ -0.38
HERC6-204ENST00000502870 TRAV18A0A075B6X5 111 aa12.69□□□□□ -0.38
HERC6-204ENST00000502870 TRAV30A0A087WSZ9 112 aa12.69□□□□□ -0.38
HERC6-204ENST00000502870 LOC102723971A0A1B0GUV8 181 aa12.69□□□□□ -0.38
HERC6-204ENST00000502870 SMIM30A4D0T7 59 aa12.69□□□□□ -0.38
HERC6-204ENST00000502870 HNRNPCP07910 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
HERC6-204ENST00000502870 NKX2-1P43699 371 aaPredicted RBP12.69□□□□□ -0.38
HERC6-204ENST00000502870 C16orf54Q6UWD8 224 aa12.69□□□□□ -0.38
HERC6-204ENST00000502870 PRSS48Q7RTY5 328 aa12.69□□□□□ -0.38
HERC6-204ENST00000502870 GLMPQ8WWB7 406 aa12.69□□□□□ -0.38
HERC6-204ENST00000502870 C7orf50Q9BRJ6 194 aaKnown RBP12.69□□□□□ -0.38
HERC6-204ENST00000502870 A0A0A6YYH2 397 aa12.68□□□□□ -0.38
HERC6-204ENST00000502870 A6NJ64 397 aa12.68□□□□□ -0.38
HERC6-204ENST00000502870 GPR31O00270 319 aa12.68□□□□□ -0.38
HERC6-204ENST00000502870 RRN3P1Q2M238 152 aa12.68□□□□□ -0.38
HERC6-204ENST00000502870 TTC32Q5I0X7 151 aa12.68□□□□□ -0.38
HERC6-204ENST00000502870 C22orf42Q6IC83 251 aa12.68□□□□□ -0.38
HERC6-204ENST00000502870 SLC35G3Q8N808 338 aa12.68□□□□□ -0.38
HERC6-204ENST00000502870 OR4X1Q8NH49 305 aa12.68□□□□□ -0.38
HERC6-204ENST00000502870 ZNF2Q9BSG1 426 aaPredicted RBP12.68□□□□□ -0.38
HERC6-204ENST00000502870 PTTG2Q9NZH5 202 aa12.68□□□□□ -0.38
HERC6-204ENST00000502870 U3KQE9 123 aa12.68□□□□□ -0.38
HERC6-204ENST00000502870 FCER2P06734 321 aa12.67□□□□□ -0.38
HERC6-204ENST00000502870 BTF3P20290 206 aaKnown RBP12.67□□□□□ -0.38
HERC6-204ENST00000502870 OPRK1P41145 380 aa12.67□□□□□ -0.38
HERC6-204ENST00000502870 DHRS11Q6UWP2 260 aa12.67□□□□□ -0.38
HERC6-204ENST00000502870 SEC22AQ96IW7 307 aa12.67□□□□□ -0.38
HERC6-204ENST00000502870 IFT46Q9NQC8 304 aa12.67□□□□□ -0.38
HERC6-204ENST00000502870 RPS10-NUDT3A0A1W2PQS6 291 aa12.66□□□□□ -0.38
HERC6-204ENST00000502870 GSTZ1O43708 216 aaPredicted RBP12.66□□□□□ -0.38
HERC6-204ENST00000502870 NUDT3O95989 172 aa12.66□□□□□ -0.38
HERC6-204ENST00000502870 IGKV3-20P01619 116 aa12.66□□□□□ -0.38
HERC6-204ENST00000502870 SCAND1P57086 179 aa12.66□□□□□ -0.38
HERC6-204ENST00000502870 FXYD7P58549 80 aa12.66□□□□□ -0.38
HERC6-204ENST00000502870 KRTAP10-2P60368 255 aa12.66□□□□□ -0.38
HERC6-204ENST00000502870 FRZBQ92765 325 aa12.66□□□□□ -0.38
HERC6-204ENST00000502870 CLUHP3Q96NS8 147 aa12.66□□□□□ -0.38
HERC6-204ENST00000502870 FLG2Q5D862 2391 aaPredicted RBP12.66□□□□□ -0.38
HERC6-204ENST00000502870 INS-IGF2F8WCM5 200 aa12.65□□□□□ -0.38
HERC6-204ENST00000502870 TBCEQ15813 527 aaPredicted RBP12.65□□□□□ -0.38
HERC6-204ENST00000502870 TIGITQ495A1 244 aa12.65□□□□□ -0.38
HERC6-204ENST00000502870 SIGLEC15Q6ZMC9 328 aa12.65□□□□□ -0.38
HERC6-204ENST00000502870 Q8WTZ3 238 aa12.65□□□□□ -0.38
HERC6-204ENST00000502870 PDCD10Q9BUL8 212 aa12.65□□□□□ -0.38
HERC6-204ENST00000502870 AUNIPQ9H7T9 357 aa12.65□□□□□ -0.38
HERC6-204ENST00000502870 DIABLOQ9NR28 239 aa12.65□□□□□ -0.38
HERC6-204ENST00000502870 RRP15Q9Y3B9 282 aaKnown RBP12.65□□□□□ -0.38
HERC6-204ENST00000502870 IGKV1-17P01599 117 aa12.64□□□□□ -0.39
HERC6-204ENST00000502870 RPL5P46777 297 aaKnown RBP12.64□□□□□ -0.39
HERC6-204ENST00000502870 SPINK9Q5DT21 86 aa12.64□□□□□ -0.39
HERC6-204ENST00000502870 Q5VSD8 79 aa12.64□□□□□ -0.39
HERC6-204ENST00000502870 SPATA31B1PQ5VZV4 182 aa12.64□□□□□ -0.39
HERC6-204ENST00000502870 LPCAT3Q6P1A2 487 aa12.64□□□□□ -0.39
HERC6-204ENST00000502870 SFXN4Q6P4A7 337 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms