RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 TMED3Q9Y3Q3 217 aa11.02□□□□□ -0.65
HDAC6-236ENST00000498808 FAT1Q14517 4588 aa11.02□□□□□ -0.65
HDAC6-236ENST00000498808 IGHV3OR16-12A0A075B7B8 117 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 TEX48A0A1B0GUV7 120 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 SMIM9A6NGZ8 99 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 NOTOA8MTQ0 251 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 EPM2AB3EWF7 344 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 OXA1LQ15070 435 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 TSPAN14Q8NG11 270 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 OR5AP2Q8NGF4 316 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 BORCS5Q969J3 196 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 NDUFB11Q9NX14 153 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 RHBDL2Q9NX52 303 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 RFNGQ9Y644 331 aa11.01□□□□□ -0.65
HDAC6-236ENST00000498808 TRAV18A0A075B6X5 111 aa11□□□□□ -0.65
HDAC6-236ENST00000498808 SPINK9Q5DT21 86 aa11□□□□□ -0.65
HDAC6-236ENST00000498808 PRSS48Q7RTY5 328 aa11□□□□□ -0.65
HDAC6-236ENST00000498808 GLMPQ8WWB7 406 aa11□□□□□ -0.65
HDAC6-236ENST00000498808 SEC22AQ96IW7 307 aa11□□□□□ -0.65
HDAC6-236ENST00000498808 DAPK2Q9UIK4 370 aa11□□□□□ -0.65
HDAC6-236ENST00000498808 U3KQE9 123 aa11□□□□□ -0.65
HDAC6-236ENST00000498808 MYCBP2O75592 4640 aa10.99□□□□□ -0.65
HDAC6-236ENST00000498808 FAM90A26D6RGX4 464 aa10.99□□□□□ -0.65
HDAC6-236ENST00000498808 INAFM2P0DMQ5 153 aa10.99□□□□□ -0.65
HDAC6-236ENST00000498808 HLA-DRB4P13762 266 aa10.99□□□□□ -0.65
HDAC6-236ENST00000498808 FXYD7P58549 80 aa10.99□□□□□ -0.65
HDAC6-236ENST00000498808 KRTAP10-2P60368 255 aa10.99□□□□□ -0.65
HDAC6-236ENST00000498808 HSPE1P61604 102 aaKnown RBP10.99□□□□□ -0.65
HDAC6-236ENST00000498808 ERHP84090 104 aaKnown RBP10.99□□□□□ -0.65
HDAC6-236ENST00000498808 C15orf53Q8NAA6 179 aa10.99□□□□□ -0.65
HDAC6-236ENST00000498808 OR4A16Q8NH70 328 aa10.99□□□□□ -0.65
HDAC6-236ENST00000498808 NARS2Q96I59 477 aaKnown RBP10.99□□□□□ -0.65
HDAC6-236ENST00000498808 ATG101Q9BSB4 218 aa10.99□□□□□ -0.65
HDAC6-236ENST00000498808 HLA-DRB4X5D2U9 266 aa10.99□□□□□ -0.65
HDAC6-236ENST00000498808 CLN5O75503 358 aa10.98□□□□□ -0.65
HDAC6-236ENST00000498808 IGKV1-39P01597 117 aa10.98□□□□□ -0.65
HDAC6-236ENST00000498808 IGKV1D-39P04432 117 aa10.98□□□□□ -0.65
HDAC6-236ENST00000498808 GDF5OSQ5U4N7 250 aa10.98□□□□□ -0.65
HDAC6-236ENST00000498808 C16orf54Q6UWD8 224 aa10.98□□□□□ -0.65
HDAC6-236ENST00000498808 DHRS11Q6UWP2 260 aa10.98□□□□□ -0.65
HDAC6-236ENST00000498808 TMEM230Q96A57 120 aa10.98□□□□□ -0.65
HDAC6-236ENST00000498808 SLC25A38Q96DW6 304 aa10.98□□□□□ -0.65
HDAC6-236ENST00000498808 ZNF2Q9BSG1 426 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-236ENST00000498808 FXYD6Q9H0Q3 95 aa10.98□□□□□ -0.65
HDAC6-236ENST00000498808 FNDC4Q9H6D8 234 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-236ENST00000498808 EHFQ9NZC4 300 aa10.98□□□□□ -0.65
HDAC6-236ENST00000498808 YTHDF2Q9Y5A9 579 aaKnown RBP10.98□□□□□ -0.65
HDAC6-236ENST00000498808 MEIS3P1A6NDR6 274 aa10.97□□□□□ -0.65
HDAC6-236ENST00000498808 IGKV1-17P01599 117 aa10.97□□□□□ -0.65
HDAC6-236ENST00000498808 EIF2B2P49770 351 aaKnown RBP10.97□□□□□ -0.65
HDAC6-236ENST00000498808 DEFB1P60022 68 aa10.97□□□□□ -0.65
HDAC6-236ENST00000498808 SNRPD3P62318 126 aaKnown RBP10.97□□□□□ -0.65
HDAC6-236ENST00000498808 TBCEQ15813 527 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-236ENST00000498808 MLANAQ16655 118 aa10.97□□□□□ -0.65
HDAC6-236ENST00000498808 H2BFWTQ7Z2G1 175 aa10.97□□□□□ -0.65
HDAC6-236ENST00000498808 CMTM1Q8IZ96 169 aa10.97□□□□□ -0.65
HDAC6-236ENST00000498808 OR5H6Q8NGV6 325 aa10.97□□□□□ -0.65
HDAC6-236ENST00000498808 AUNIPQ9H7T9 357 aa10.97□□□□□ -0.65
HDAC6-236ENST00000498808 GPR31O00270 319 aa10.96□□□□□ -0.65
HDAC6-236ENST00000498808 IGKV3-20P01619 116 aa10.96□□□□□ -0.65
HDAC6-236ENST00000498808 RFX2P48378 723 aa10.96□□□□□ -0.65
HDAC6-236ENST00000498808 AP2S1P53680 142 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-236ENST00000498808 IZUMO4Q1ZYL8 232 aa10.96□□□□□ -0.65
HDAC6-236ENST00000498808 TIGITQ495A1 244 aa10.96□□□□□ -0.65
HDAC6-236ENST00000498808 SFXN4Q6P4A7 337 aa10.96□□□□□ -0.65
HDAC6-236ENST00000498808 ZNF709Q8N972 641 aa10.96□□□□□ -0.65
HDAC6-236ENST00000498808 OR4X1Q8NH49 305 aa10.96□□□□□ -0.65
HDAC6-236ENST00000498808 SEPSECSQ9HD40 501 aaKnown RBP10.96□□□□□ -0.65
HDAC6-236ENST00000498808 RRP15Q9Y3B9 282 aaKnown RBP10.96□□□□□ -0.65
HDAC6-236ENST00000498808 LOC102723971A0A1B0GUV8 181 aa10.95□□□□□ -0.66
HDAC6-236ENST00000498808 RNASE2P10153 161 aaKnown RBP10.95□□□□□ -0.66
HDAC6-236ENST00000498808 SNCAP37840 140 aa10.95□□□□□ -0.66
HDAC6-236ENST00000498808 DAD1P61803 113 aa10.95□□□□□ -0.66
HDAC6-236ENST00000498808 PHLDA2Q53GA4 152 aa10.95□□□□□ -0.66
HDAC6-236ENST00000498808 MRGPRFQ96AM1 343 aa10.95□□□□□ -0.66
HDAC6-236ENST00000498808 NRN1Q9NPD7 142 aa10.95□□□□□ -0.66
HDAC6-236ENST00000498808 FAM212BQ9NTI7 297 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-236ENST00000498808 FLG2Q5D862 2391 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-236ENST00000498808 INS-IGF2F8WCM5 200 aa10.94□□□□□ -0.66
HDAC6-236ENST00000498808 CORTO00230 105 aa10.94□□□□□ -0.66
HDAC6-236ENST00000498808 HNRNPCP07910 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
HDAC6-236ENST00000498808 NKX2-1P43699 371 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-236ENST00000498808 CBX5P45973 191 aa10.94□□□□□ -0.66
HDAC6-236ENST00000498808 C1orf158Q8N1D5 194 aa10.94□□□□□ -0.66
HDAC6-236ENST00000498808 TXNL4BQ9NX01 149 aaKnown RBP10.94□□□□□ -0.66
HDAC6-236ENST00000498808 A0A0A6YYH2 397 aa10.93□□□□□ -0.66
HDAC6-236ENST00000498808 A6NJ64 397 aa10.93□□□□□ -0.66
HDAC6-236ENST00000498808 HBE1P02100 147 aa10.93□□□□□ -0.66
HDAC6-236ENST00000498808 PMP2P02689 132 aa10.93□□□□□ -0.66
HDAC6-236ENST00000498808 OPRK1P41145 380 aa10.93□□□□□ -0.66
HDAC6-236ENST00000498808 GSG1LQ6UXU4 331 aa10.93□□□□□ -0.66
HDAC6-236ENST00000498808 KRTAP1-5Q9BYS1 174 aa10.93□□□□□ -0.66
HDAC6-236ENST00000498808 SLC35B3Q9H1N7 401 aa10.93□□□□□ -0.66
HDAC6-236ENST00000498808 VCXQ9H320 206 aa10.93□□□□□ -0.66
HDAC6-236ENST00000498808 LINC00588Q9Y4M8 146 aa10.93□□□□□ -0.66
HDAC6-236ENST00000498808 USF2Q15853 346 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-236ENST00000498808 SIGLEC15Q6ZMC9 328 aa10.92□□□□□ -0.66
HDAC6-236ENST00000498808 TBC1D26Q86UD7 250 aa10.92□□□□□ -0.66
HDAC6-236ENST00000498808 SLC35G3Q8N808 338 aa10.92□□□□□ -0.66
HDAC6-236ENST00000498808 SAV1Q9H4B6 383 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms