RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 IZUMO4Q1ZYL8 232 aa10.55□□□□□ -0.72
TRAF4-212ENST00000498540 TBC1D26Q86UD7 250 aa10.55□□□□□ -0.72
TRAF4-212ENST00000498540 MRPL36Q9P0J6 103 aaKnown RBP10.55□□□□□ -0.72
TRAF4-212ENST00000498540 IGLV2-18A0A075B6J9 118 aa10.54□□□□□ -0.72
TRAF4-212ENST00000498540 LOC100506127A0A0U1RQW1 187 aa10.54□□□□□ -0.72
TRAF4-212ENST00000498540 A0A1W2PS18 150 aa10.54□□□□□ -0.72
TRAF4-212ENST00000498540 NAT1P18440 290 aa10.54□□□□□ -0.72
TRAF4-212ENST00000498540 CRYBB3P26998 211 aa10.54□□□□□ -0.72
TRAF4-212ENST00000498540 TAS2R46P59540 309 aa10.54□□□□□ -0.72
TRAF4-212ENST00000498540 OR6F1Q8NGZ6 308 aa10.54□□□□□ -0.72
TRAF4-212ENST00000498540 METTL26Q96S19 204 aa10.54□□□□□ -0.72
TRAF4-212ENST00000498540 FAM212BQ9NTI7 297 aaPredicted RBP10.54□□□□□ -0.72
TRAF4-212ENST00000498540 HRH1P35367 487 aa10.53□□□□□ -0.72
TRAF4-212ENST00000498540 HSPA13P48723 471 aa10.53□□□□□ -0.72
TRAF4-212ENST00000498540 PSMG4Q5JS54 123 aa10.53□□□□□ -0.72
TRAF4-212ENST00000498540 Q6ZR54 194 aa10.53□□□□□ -0.72
TRAF4-212ENST00000498540 FCGR1BQ92637 280 aa10.53□□□□□ -0.72
TRAF4-212ENST00000498540 RAB40CQ96S21 281 aa10.53□□□□□ -0.72
TRAF4-212ENST00000498540 CD74P04233 296 aa10.52□□□□□ -0.73
TRAF4-212ENST00000498540 HLA-DMAP28067 261 aa10.52□□□□□ -0.73
TRAF4-212ENST00000498540 SNCAP37840 140 aa10.52□□□□□ -0.73
TRAF4-212ENST00000498540 TAS2R20P59543 309 aa10.52□□□□□ -0.73
TRAF4-212ENST00000498540 LYSMD2Q8IV50 215 aa10.52□□□□□ -0.73
TRAF4-212ENST00000498540 FNDC4Q9H6D8 234 aaPredicted RBP10.52□□□□□ -0.73
TRAF4-212ENST00000498540 CLN5O75503 358 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 IFNA10P01566 189 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 RNASE2P10153 161 aaKnown RBP10.51□□□□□ -0.73
TRAF4-212ENST00000498540 S100GP29377 79 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 DHRS2Q13268 280 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 MLANAQ16655 118 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 TMEM69Q5SWH9 247 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 Q6ZRM9 215 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 UBE2DNLQ8IWF7 75 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 SLC35G3Q8N808 338 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 S100A16Q96FQ6 103 aaKnown RBP10.51□□□□□ -0.73
TRAF4-212ENST00000498540 VCX3BQ9H321 246 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 XCL2Q9UBD3 114 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 NACAE9PAV3 2078 aa10.51□□□□□ -0.73
TRAF4-212ENST00000498540 HSPG2P98160 4391 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 HELTA6NFD8 242 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 INS-IGF2F8WCM5 200 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 IGKV1-17P01599 117 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 IGKV1-5P01602 117 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 NPY1RP25929 384 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 OPRK1P41145 380 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 TIGITQ495A1 244 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 KCTD21Q4G0X4 260 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 UBE2NLQ5JXB2 153 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 OR4X1Q8NH49 305 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 TMEM230Q96A57 120 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 RAB26Q9ULW5 256 aa10.5□□□□□ -0.73
TRAF4-212ENST00000498540 A0A0B4J293 547 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 CORTO00230 105 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 IFNA21P01568 189 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 IFNA17P01571 189 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 P0C879 139 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 TGFBR1P36897 503 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 TSPAN5P62079 268 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 LPCAT3Q6P1A2 487 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 GLMPQ8WWB7 406 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 NARS2Q96I59 477 aaKnown RBP10.49□□□□□ -0.73
TRAF4-212ENST00000498540 C1QTNF4Q9BXJ3 329 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 PLA2G2EQ9NZK7 142 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 U3KQE9 123 aa10.49□□□□□ -0.73
TRAF4-212ENST00000498540 FAM90A26D6RGX4 464 aa10.48□□□□□ -0.73
TRAF4-212ENST00000498540 H3BMM0 161 aa10.48□□□□□ -0.73
TRAF4-212ENST00000498540 PRSS3P35030 304 aa10.48□□□□□ -0.73
TRAF4-212ENST00000498540 ETV6P41212 452 aa10.48□□□□□ -0.73
TRAF4-212ENST00000498540 EMP1P54849 157 aa10.48□□□□□ -0.73
TRAF4-212ENST00000498540 C16orf54Q6UWD8 224 aa10.48□□□□□ -0.73
TRAF4-212ENST00000498540 SAMD12Q8N8I0 201 aa10.48□□□□□ -0.73
TRAF4-212ENST00000498540 TMEM127O75204 238 aa10.47□□□□□ -0.73
TRAF4-212ENST00000498540 SPART-AS1P0CW21 52 aa10.47□□□□□ -0.73
TRAF4-212ENST00000498540 HOXA1P49639 335 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-212ENST00000498540 EIF2B2P49770 351 aaKnown RBP10.47□□□□□ -0.73
TRAF4-212ENST00000498540 SUB1P53999 127 aaKnown RBP eCLIP10.47□□□□□ -0.73
TRAF4-212ENST00000498540 UCP3P55916 312 aa10.47□□□□□ -0.73
TRAF4-212ENST00000498540 NUTF2P61970 127 aaKnown RBP10.47□□□□□ -0.73
TRAF4-212ENST00000498540 ZNF705AQ6ZN79 300 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-212ENST00000498540 GPX8Q8TED1 209 aa10.47□□□□□ -0.73
TRAF4-212ENST00000498540 ZNF705FA8MVS1 300 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-212ENST00000498540 SCGB2A1O75556 95 aa10.46□□□□□ -0.73
TRAF4-212ENST00000498540 HNRNPCP07910 306 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRAF4-212ENST00000498540 ZNF705DP0CH99 300 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-212ENST00000498540 ZNF705BP0CI00 300 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-212ENST00000498540 PI3P19957 117 aa10.46□□□□□ -0.73
TRAF4-212ENST00000498540 RPL5P46777 297 aaKnown RBP10.46□□□□□ -0.73
TRAF4-212ENST00000498540 AKR1C2P52895 323 aa10.46□□□□□ -0.73
TRAF4-212ENST00000498540 SNRPD3P62318 126 aaKnown RBP10.46□□□□□ -0.73
TRAF4-212ENST00000498540 BSXQ3C1V8 233 aa10.46□□□□□ -0.73
TRAF4-212ENST00000498540 SOHLH1Q5JUK2 328 aa10.46□□□□□ -0.73
TRAF4-212ENST00000498540 TP53RKQ96S44 253 aa10.46□□□□□ -0.73
TRAF4-212ENST00000498540 NEU1Q99519 415 aa10.46□□□□□ -0.73
TRAF4-212ENST00000498540 PDCD10Q9BUL8 212 aa10.46□□□□□ -0.73
TRAF4-212ENST00000498540 IGHV3OR16-12A0A075B7B8 117 aa10.45□□□□□ -0.74
TRAF4-212ENST00000498540 IGLC1P0CG04 106 aa10.45□□□□□ -0.74
TRAF4-212ENST00000498540 HLA-DRB4P13762 266 aa10.45□□□□□ -0.74
TRAF4-212ENST00000498540 AP2S1P53680 142 aaPredicted RBP10.45□□□□□ -0.74
TRAF4-212ENST00000498540 FXYD7P58549 80 aa10.45□□□□□ -0.74
TRAF4-212ENST00000498540 DEFB1P60022 68 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms