RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 SUB1P53999 127 aaKnown RBP eCLIP4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 AP3S2P59780 193 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 PAFAH1B2P68402 229 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 FFAR4Q5NUL3 377 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 Q6ZS49 121 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 MRPL30Q8TCC3 161 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 MRGPRDQ8TDS7 321 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 CYYR1Q96J86 154 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 CNBD2Q96M20 576 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 YPEL2Q96QA6 119 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 LPAR5Q9H1C0 372 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 OR51J1Q9H342 316 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 ABCB10Q9NRK6 738 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 SPATA2Q9UM82 520 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 A6NDN8 102 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 IFITM5A6NNB3 132 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 K7EQG2 157 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 IGHG2P01859 326 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 HBZP02008 142 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 IFNA6P05013 189 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 CTXN2P0C2S0 81 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 OR8U9P0C7N5 309 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 SLC6A1P30531 599 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 CRIP2P52943 208 aaPredicted RBP4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 ACTBP60709 375 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 KPRPQ5T749 579 aaPredicted RBP4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 NDUFA11Q86Y39 141 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 FAM71E2Q8N5Q1 922 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 C5orf56Q8N8D9 126 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 OR8U1Q8NH10 309 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 RNASEH2CQ8TDP1 164 aaKnown RBP4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 RTN4IP1Q8WWV3 396 aaPredicted RBP4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 TAF15Q92804 592 aaKnown RBP eCLIP4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 ARL11Q969Q4 196 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 SULT4A1Q9BR01 284 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 TMED9Q9BVK6 235 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 SELENOIQ9C0D9 397 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 MOB4Q9Y3A3 225 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 V9GY05 133 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 STAB2Q8WWQ8 2551 aa4.47□□□□□ -1.69
TMEM39A-212ENST00000497993 IGHV1-3A0A0C4DH29 117 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 M0R036 132 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 MFNGO00587 321 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 NDUFA3O95167 84 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 HPRT1P00492 218 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 RCC1P18754 421 aaPredicted RBP4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 IL3RAP26951 378 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 KIR2DS2P43631 304 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 DYNC1I2Q13409 638 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 CLINT1Q14677 625 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 LY6EQ16553 131 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 MORN2Q502X0 79 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 ATAD3CQ5T2N8 411 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 ZNF833PQ6ZTB9 187 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 PPP1R27Q86WC6 154 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 FAM3DQ96BQ1 224 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 PRAC1Q96KF2 57 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 IFI27L2Q9H2X8 130 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 BANF2Q9H503 90 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 TAF9BQ9HBM6 251 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 C12orf4Q9NQ89 552 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 PLSCR3Q9NRY6 295 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 TXNL4BQ9NX01 149 aaKnown RBP4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 Q9UF83 564 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 HILPDAQ9Y5L2 63 aa4.46□□□□□ -1.7
TMEM39A-212ENST00000497993 SDCBPO00560 298 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 PDCD5O14737 125 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 PAX6P26367 422 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 RAB13P51153 203 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 RPL32P62910 135 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 BLCAPP62952 87 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 HLA-DRB3P79483 266 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 ASAH1Q13510 395 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 RAB31Q13636 194 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 DIAPH2-AS1Q14236 149 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 AKIRIN2Q53H80 203 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 PDZD11Q5EBL8 140 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 OR10K2Q6IF99 312 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 C6orf201Q7Z4U5 140 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 Q8N402 240 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 DRAM1Q8N682 238 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 Q8N9W7 124 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 HSD17B11Q8NBQ5 300 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 WFDC9Q8NEX5 89 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 NPBQ8NG41 125 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 OR10R2Q8NGX6 335 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 OR4K15Q8NH41 348 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 OR1L1Q8NH94 360 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 MYOZ3Q8TDC0 251 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 RASL10AQ92737 203 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 TMEM203Q969S6 136 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 GALMQ96C23 342 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 YIPF6Q96EC8 236 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 ADTRPQ96IZ2 230 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 PGLYRP4Q96LB8 373 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 HIST1H4GQ99525 98 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 RNF5Q99942 180 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 ABCG5Q9H222 651 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 IFT46Q9NQC8 304 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms