RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 TMEM68Q96MH6 324 aa12.42□□□□□ -0.42
PTK7-220ENST00000497957 WDR61Q9GZS3 305 aaKnown RBP12.42□□□□□ -0.42
PTK7-220ENST00000497957 KLK9Q9UKQ9 250 aa12.42□□□□□ -0.42
PTK7-220ENST00000497957 DFFBO76075 338 aa12.41□□□□□ -0.42
PTK7-220ENST00000497957 GATA2P23769 480 aaPredicted RBP12.41□□□□□ -0.42
PTK7-220ENST00000497957 TPPP2P59282 170 aa12.41□□□□□ -0.42
PTK7-220ENST00000497957 KIAA0141Q14154 515 aaPredicted RBP12.41□□□□□ -0.42
PTK7-220ENST00000497957 FAM74A1Q5RGS3 127 aa12.41□□□□□ -0.42
PTK7-220ENST00000497957 ACSM6Q6P461 480 aa12.41□□□□□ -0.42
PTK7-220ENST00000497957 BTNL8Q6UX41 500 aa12.41□□□□□ -0.42
PTK7-220ENST00000497957 ALKAL2Q6UX46 152 aa12.41□□□□□ -0.42
PTK7-220ENST00000497957 STOML3Q8TAV4 291 aa12.41□□□□□ -0.42
PTK7-220ENST00000497957 ZNF414Q96IQ9 312 aa12.41□□□□□ -0.42
PTK7-220ENST00000497957 SLC35E1Q96K37 410 aa12.41□□□□□ -0.42
PTK7-220ENST00000497957 GINS3Q9BRX5 216 aa12.41□□□□□ -0.42
PTK7-220ENST00000497957 ZNF580Q9UK33 172 aa12.41□□□□□ -0.42
PTK7-220ENST00000497957 BORCS7-ASMTA0A0B4J1R7 106 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 PSMB11A5LHX3 300 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 IFNA5P01569 189 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 IGHV3-11P01762 117 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 CRYBA1P05813 215 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 OR10J1P30954 320 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 C15orf32Q32M92 178 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 UBAC2Q8NBM4 344 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 LINC01006Q8NI28 216 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 PCNPQ8WW12 178 aaKnown RBP12.4□□□□□ -0.42
PTK7-220ENST00000497957 TMED6Q8WW62 240 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 CCDC140Q96MF4 163 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 JMJD8Q96S16 334 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 GGACTQ9BVM4 153 aa12.4□□□□□ -0.42
PTK7-220ENST00000497957 LSM4Q9Y4Z0 139 aaKnown RBP12.4□□□□□ -0.42
PTK7-220ENST00000497957 EIF3GO75821 320 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTK7-220ENST00000497957 TRBV12-3P01733 135 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 IGHG4P01861 327 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 RPLP1P05386 114 aaKnown RBP12.39□□□□□ -0.43
PTK7-220ENST00000497957 ZNF90Q03938 601 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 EXOSC2Q13868 293 aaKnown RBP12.39□□□□□ -0.43
PTK7-220ENST00000497957 TIGITQ495A1 244 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 TCTEX1D4Q5JR98 221 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 MIC13Q5XKP0 118 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 C18orf65Q6ZTR6 163 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 TMEM144Q7Z5S9 345 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 BAP18Q8IXM2 172 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 OR1L6Q8NGR2 347 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 CACNG8Q8WXS5 425 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 GGTLC1Q9BX51 225 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 SLC25A32Q9H2D1 315 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 C16orf95Q9H693 158 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 VSIRQ9H7M9 311 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 NPVFQ9HCQ7 196 aa12.39□□□□□ -0.43
PTK7-220ENST00000497957 RPS10-NUDT3A0A1W2PQS6 291 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 CORTO00230 105 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 JTBO76095 146 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 TPT1P13693 172 aaKnown RBP12.38□□□□□ -0.43
PTK7-220ENST00000497957 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
PTK7-220ENST00000497957 PSMB8P28062 276 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 RAB9AP51151 201 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 CENPVQ7Z7K6 275 aaPredicted RBP12.38□□□□□ -0.43
PTK7-220ENST00000497957 KLHDC1Q8N7A1 406 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.38□□□□□ -0.43
PTK7-220ENST00000497957 THAP8Q8NA92 274 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 NECAP1Q8NC96 275 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 ZNF502Q8TBZ5 544 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 SCGB1C1Q8TD33 95 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 WIPF2Q8TF74 440 aaPredicted RBP12.38□□□□□ -0.43
PTK7-220ENST00000497957 OR5B12Q96R08 314 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 NPCDR1Q9BY65 106 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 C21orf62Q9NYP8 219 aa12.38□□□□□ -0.43
PTK7-220ENST00000497957 OR2T8A6NH00 312 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 FNDC10F2Z333 226 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 AGPAT2O15120 278 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 IGLC1P0CG04 106 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 C4BPBP20851 252 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 ELLP55199 621 aaPredicted RBP12.37□□□□□ -0.43
PTK7-220ENST00000497957 ATP5G2Q06055 141 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 ZNF266Q14584 549 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 Q56UQ5 140 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 GCSAMLQ5JQS6 135 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 TEX261Q6UWH6 196 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 C11orf44Q8N8P7 122 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 ZNF680Q8NEM1 530 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 OR4X1Q8NH49 305 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 CHRDL1Q9BU40 450 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 PARD6GQ9BYG4 376 aaPredicted RBP12.37□□□□□ -0.43
PTK7-220ENST00000497957 GNB4Q9HAV0 340 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 SLC45A2Q9UMX9 530 aa12.37□□□□□ -0.43
PTK7-220ENST00000497957 PPP5D1E7EU14 171 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 CLN5O75503 358 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 YIF1AO95070 293 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 SCAF4O95104 1147 aaKnown RBP12.36□□□□□ -0.43
PTK7-220ENST00000497957 NDUFA7O95182 113 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 IGKV1-17P01599 117 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 LINC00869P0C866 280 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 SPP1P10451 314 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 GPR183P32249 361 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 CAMLGP49069 296 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 MFAP4P55083 255 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 KRTAP10-3P60369 221 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 ETFRF1Q6IPR1 90 aa12.36□□□□□ -0.43
PTK7-220ENST00000497957 TEPPQ6URK8 271 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms