RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 TMED3Q9Y3Q3 217 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 CEBPZOSA8MTT3 80 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 PITX3O75364 302 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 UPK1BO75841 260 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 TCRBP04435 133 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 SPNP16150 400 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 HTR2BP41595 481 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 ASAH1Q13510 395 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 FAM106AQ4KMX7 169 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 C4orf46Q504U0 113 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 Q56UQ5 140 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 ADAMTSL5Q6ZMM2 481 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 UBAC2Q8NBM4 344 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 SLC24A4Q8NFF2 622 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 OR1S1Q8NH92 325 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 PINX1Q96BK5 328 aaKnown RBP8.54□□□□□ -1.04
ERCC8-208ENST00000497892 PRR25Q96S07 402 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 TXN2Q99757 166 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 CHRDL1Q9BU40 450 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 ZNF436Q9C0F3 470 aaPredicted RBP8.54□□□□□ -1.04
ERCC8-208ENST00000497892 NUDT15Q9NV35 164 aa8.54□□□□□ -1.04
ERCC8-208ENST00000497892 TMEM213A2RRL7 107 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 C2orf70A6NJV1 201 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 CTSGP08311 255 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 MFAP4P55083 255 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 DCTN2Q13561 401 aaKnown RBP8.53□□□□□ -1.04
ERCC8-208ENST00000497892 C2orf83Q53S99 150 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 C11orf87Q6NUJ2 197 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 UNQ9165/PRO28630Q6UXU0 137 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 COQ8AQ8NI60 647 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 DTD1Q8TEA8 209 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 TMEM190Q8WZ59 177 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 HIPK2Q9H2X6 1198 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 RBKSQ9H477 322 aa8.53□□□□□ -1.04
ERCC8-208ENST00000497892 TRAV6A0A075B6T7 132 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 IGHV3-35A0A0C4DH35 117 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 ZNF320A2RRD8 509 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 FAM90A26D6RGX4 464 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 NDUFA4O00483 81 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 ADAP1O75689 374 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 IGHV3-48P01763 117 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 HOXB5P09067 269 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 FOLR2P14207 255 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 EDN2P20800 178 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 NPY1RP25929 384 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 OPRK1P41145 380 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 GGNBP1Q5YKI7 109 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 MZT2BQ6NZ67 158 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 MITD1Q8WV92 249 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 TMEM170AQ8WVE7 144 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 ZNF414Q96IQ9 312 aa8.52□□□□□ -1.05
ERCC8-208ENST00000497892 FNDC4Q9H6D8 234 aaPredicted RBP8.52□□□□□ -1.05
ERCC8-208ENST00000497892 FAM240BA0A1B0GVZ2 78 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 MPTX1A8MV57 137 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 NUPL2O15504 423 aaKnown RBP8.51□□□□□ -1.05
ERCC8-208ENST00000497892 GNG7O60262 68 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 LY86O95711 162 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 GP9P14770 177 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 CBLN1P23435 193 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 NPBWR1P48145 328 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 ELLP55199 621 aaPredicted RBP8.51□□□□□ -1.05
ERCC8-208ENST00000497892 IFITM3Q01628 133 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 RELQ04864 619 aaPredicted RBP8.51□□□□□ -1.05
ERCC8-208ENST00000497892 LCN12Q6JVE5 192 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 DUSP18Q8NEJ0 188 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 OR52B4Q8NGK2 314 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 OR2K2Q8NGT1 345 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 RNASEH2CQ8TDP1 164 aaKnown RBP8.51□□□□□ -1.05
ERCC8-208ENST00000497892 CACNG8Q8WXS5 425 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 PALMDQ9NP74 551 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 UFC1Q9Y3C8 167 aa8.51□□□□□ -1.05
ERCC8-208ENST00000497892 LSM4Q9Y4Z0 139 aaKnown RBP8.51□□□□□ -1.05
ERCC8-208ENST00000497892 RPS10-NUDT3A0A1W2PQS6 291 aa8.5□□□□□ -1.05
ERCC8-208ENST00000497892 IFNA10P01566 189 aa8.5□□□□□ -1.05
ERCC8-208ENST00000497892 ATP5IP56385 69 aaPredicted RBP8.5□□□□□ -1.05
ERCC8-208ENST00000497892 CD300EQ496F6 205 aaPredicted RBP8.5□□□□□ -1.05
ERCC8-208ENST00000497892 TM4SF20Q53R12 229 aa8.5□□□□□ -1.05
ERCC8-208ENST00000497892 NOXA1Q86UR1 476 aa8.5□□□□□ -1.05
ERCC8-208ENST00000497892 OR4X1Q8NH49 305 aa8.5□□□□□ -1.05
ERCC8-208ENST00000497892 DYNLRB2Q8TF09 96 aa8.5□□□□□ -1.05
ERCC8-208ENST00000497892 MARC2Q969Z3 335 aa8.5□□□□□ -1.05
ERCC8-208ENST00000497892 DAZ1Q9NQZ3 744 aaKnown RBP8.5□□□□□ -1.05
ERCC8-208ENST00000497892 TECRQ9NZ01 308 aaKnown RBP8.5□□□□□ -1.05
ERCC8-208ENST00000497892 MRPL36Q9P0J6 103 aaKnown RBP8.5□□□□□ -1.05
ERCC8-208ENST00000497892 U3KQ87 197 aa8.5□□□□□ -1.05
ERCC8-208ENST00000497892 IZUMO1RA6ND01 250 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 C15orf62A8K5M9 175 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 CLN5O75503 358 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 MED6O75586 246 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 IFNA21P01568 189 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 C8orf88P0DMB2 117 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 SLC25A4P12235 298 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 MLANAQ16655 118 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 DEFB114Q30KQ6 69 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 DEFB121Q5J5C9 76 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 UXS1Q8NBZ7 420 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 ENKURQ8TC29 256 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 ZNF431Q8TF32 576 aaPredicted RBP8.49□□□□□ -1.05
ERCC8-208ENST00000497892 OR10C1Q96KK4 312 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 MRPL27Q9P0M9 148 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms