RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 HIST3H2BBQ8N257 126 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 OR51A2Q8NGJ7 313 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 CHMP6Q96FZ7 201 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 RP1P56715 2156 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 INTS1Q8N201 2190 aaKnown RBP1.39□□□□□ -2.19
SMC4-225ENST00000497203 MED13Q9UHV7 2174 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 GLI3P10071 1580 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 NEO1Q92859 1461 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 ROBO3Q96MS0 1386 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 RP1L1Q8IWN7 2480 aaPredicted RBP1.38□□□□□ -2.19
SMC4-225ENST00000497203 hCG_1818297A0A087WSY0 165 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 A8MT66 165 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 BUB1B-PAK6H3BSN5 160 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 J3QRK9 145 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 SHBGP04278 402 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 C8GP07360 202 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 ARL14EPLP0DKL9 152 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 CASP1P29466 404 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 CDC42P60953 191 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 YPEL3P61236 119 aaPredicted RBP1.38□□□□□ -2.19
SMC4-225ENST00000497203 ERVS71-1P61550 626 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 MRPS25P82663 173 aaKnown RBP1.38□□□□□ -2.19
SMC4-225ENST00000497203 KHDC3LQ587J8 217 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 SPANXN5Q5MJ07 72 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 UNQ6190/PRO20217Q6UXQ8 127 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 Q6ZSA8 131 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 SIGLECL1Q8N7X8 197 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 OR4E2Q8NGC2 313 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 ITFG2Q969R8 447 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 SERPINI1Q99574 410 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 ADAT1Q9BUB4 502 aaKnown RBP1.38□□□□□ -2.19
SMC4-225ENST00000497203 KIFC1Q9BW19 673 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 NMNAT1Q9HAN9 279 aaPredicted RBP1.38□□□□□ -2.19
SMC4-225ENST00000497203 C14orf105Q9NVL8 296 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 IDI2-AS1Q9NZ38 188 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 CYSLTR1Q9Y271 337 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 ARL2BPQ9Y2Y0 163 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 SOX21Q9Y651 276 aaPredicted RBP1.38□□□□□ -2.19
SMC4-225ENST00000497203 MYOFQ9NZM1 2061 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 HECW2Q9P2P5 1572 aa1.38□□□□□ -2.19
SMC4-225ENST00000497203 IGKV2-40A0A087WW87 121 aaPredicted RBP1.37□□□□□ -2.19
SMC4-225ENST00000497203 IGKV3D-7A0A0C4DH55 119 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 IGKV3OR2-268A0A0C4DH90 116 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 OR2J2O76002 312 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 OR7C1O76099 320 aaPredicted RBP1.37□□□□□ -2.19
SMC4-225ENST00000497203 ZNF682O95780 498 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 IGKV2D-40P01614 121 aaPredicted RBP1.37□□□□□ -2.19
SMC4-225ENST00000497203 ANGP03950 147 aaKnown RBP1.37□□□□□ -2.19
SMC4-225ENST00000497203 IFNA6P05013 189 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 IL9P15248 144 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 MRPS15P82914 257 aaKnown RBP1.37□□□□□ -2.19
SMC4-225ENST00000497203 C12orf45Q8N5I9 185 aaPredicted RBP1.37□□□□□ -2.19
SMC4-225ENST00000497203 OR5A1Q8NGJ0 315 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 SIGMAR1Q99720 223 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 OSTCQ9NRP0 149 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 UQCC1Q9NVA1 299 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 OR5AC2Q9NZP5 309 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 SETD5Q9C0A6 1442 aa1.37□□□□□ -2.19
SMC4-225ENST00000497203 STRCQ7RTU9 1775 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 ECM29Q5VYK3 1845 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 TRAV14DV4A0A0A6YYC5 116 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 CCDC144AA2RUR9 1427 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 TMEM212A6NML5 194 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 OR2B3O76000 313 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 ZNF846Q147U1 533 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 CDK5R1Q15078 307 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 TMED2Q15363 201 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 RHEBQ15382 184 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 LIN52Q52LA3 116 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 TEX36Q5VZQ5 186 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 Q6ZQT0 140 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 PHF13Q86YI8 300 aaPredicted RBP1.36□□□□□ -2.19
SMC4-225ENST00000497203 C12orf29Q8N999 325 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 OR52L1Q8NGH7 329 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 RNASE7Q9H1E1 156 aaKnown RBP1.36□□□□□ -2.19
SMC4-225ENST00000497203 TVP23BQ9NYZ1 205 aa1.36□□□□□ -2.19
SMC4-225ENST00000497203 ZNF106Q9H2Y7 1883 aaKnown RBP1.35□□□□□ -2.19
SMC4-225ENST00000497203 ANAPC1Q9H1A4 1944 aa1.35□□□□□ -2.19
SMC4-225ENST00000497203 PLXND1Q9Y4D7 1925 aa1.35□□□□□ -2.19
SMC4-225ENST00000497203 CTSDP07339 412 aaPredicted RBP1.35□□□□□ -2.19
SMC4-225ENST00000497203 C10orf55Q5SWW7 151 aa1.35□□□□□ -2.19
SMC4-225ENST00000497203 Q6Q795 121 aa1.35□□□□□ -2.19
SMC4-225ENST00000497203 GNPDA2Q8TDQ7 276 aa1.35□□□□□ -2.19
SMC4-225ENST00000497203 RNF122Q9H9V4 155 aa1.35□□□□□ -2.19
SMC4-225ENST00000497203 NHP2Q9NX24 153 aaKnown RBP1.35□□□□□ -2.19
SMC4-225ENST00000497203 ALPK2Q86TB3 2170 aa1.35□□□□□ -2.19
SMC4-225ENST00000497203 MICAL3Q7RTP6 2002 aa1.35□□□□□ -2.19
SMC4-225ENST00000497203 DOCK3Q8IZD9 2030 aa1.35□□□□□ -2.19
SMC4-225ENST00000497203 ARFGEF3Q5TH69 2177 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 IGKV3-7A0A075B6H7 116 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 A0A087X0T9 212 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 ATP5HO75947 161 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 BAALC-AS2P0C853 105 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 SMIM17P0DL12 118 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 CRYGAP11844 174 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 SPI1P17947 270 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 FKBP2P26885 142 aaKnown RBP1.34□□□□□ -2.19
SMC4-225ENST00000497203 HSD11B1P28845 292 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 LINC01554Q52M75 96 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 Q8N2B8 174 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms